(23 nodes) Maintenance of protein location network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A167JY85	ER lumen protein-retaining receptor. (215 aa)
	A0A163DV84	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (921 aa)
	A0A163DV23	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (924 aa)
	A0A163D9N0	Uncharacterized protein. (224 aa)
	A0A163AT21	Uncharacterized protein. (592 aa)
	A0A162ZIJ5	ER lumen protein-retaining receptor. (214 aa)
	A0A162WTB7	Uncharacterized protein. (276 aa)
	A0A162WNW1	Vps5 domain-containing protein. (196 aa)
	A0A162UHU1	GOLD domain-containing protein. (201 aa)
	A0A162U249	GOLD domain-containing protein. (198 aa)
	A0A162TVS0	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (203 aa)
	A0A162Q001	Uncharacterized protein. (367 aa)
	A0A162TEV8	Mcp5_PH domain-containing protein. (1955 aa)
	A0A162T2G4	Uncharacterized protein. (574 aa)
	A0A162TTL8	Uncharacterized protein. (226 aa)
	A0A162PT67	Uncharacterized protein. (331 aa)
	A0A162NDJ2	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. (126 aa)
	A0A167MDB7	Uncharacterized protein. (3249 aa)
	A0A167L1B6	PX domain-containing protein. (90 aa)
	A0A167KG88	Uncharacterized protein. (3169 aa)
	A0A167PX39	PH domain-containing protein. (771 aa)
	A0A167R6I0	Uncharacterized protein. (352 aa)
	A0A167R3C1	Uncharacterized protein. (681 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162NDJ2	A0A162Q001	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	Uncharacterized protein.	0.574
A0A162Q001	A0A162NDJ2	Uncharacterized protein.	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	0.574
A0A162TEV8	A0A162U249	Mcp5_PH domain-containing protein.	GOLD domain-containing protein.	0.630
A0A162TEV8	A0A162UHU1	Mcp5_PH domain-containing protein.	GOLD domain-containing protein.	0.630
A0A162TVS0	A0A162U249	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	GOLD domain-containing protein.	0.504
A0A162TVS0	A0A162UHU1	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	GOLD domain-containing protein.	0.504
A0A162TVS0	A0A162ZIJ5	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	ER lumen protein-retaining receptor.	0.413
A0A162TVS0	A0A167JY85	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	ER lumen protein-retaining receptor.	0.413
A0A162U249	A0A162TEV8	GOLD domain-containing protein.	Mcp5_PH domain-containing protein.	0.630
A0A162U249	A0A162TVS0	GOLD domain-containing protein.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.504
A0A162U249	A0A162ZIJ5	GOLD domain-containing protein.	ER lumen protein-retaining receptor.	0.723
A0A162U249	A0A167JY85	GOLD domain-containing protein.	ER lumen protein-retaining receptor.	0.723
A0A162U249	A0A167PX39	GOLD domain-containing protein.	PH domain-containing protein.	0.630
A0A162UHU1	A0A162TEV8	GOLD domain-containing protein.	Mcp5_PH domain-containing protein.	0.630
A0A162UHU1	A0A162TVS0	GOLD domain-containing protein.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.504
A0A162UHU1	A0A162ZIJ5	GOLD domain-containing protein.	ER lumen protein-retaining receptor.	0.723
A0A162UHU1	A0A167JY85	GOLD domain-containing protein.	ER lumen protein-retaining receptor.	0.723
A0A162UHU1	A0A167PX39	GOLD domain-containing protein.	PH domain-containing protein.	0.630
A0A162WNW1	A0A163DV23	Vps5 domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.901
A0A162WNW1	A0A163DV84	Vps5 domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.901