(40 nodes) mRNA cis splicing, via spliceosome network (Phycomyces blakesleeanus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	A0A162N3L9	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1340 aa)
	A0A167R149	Uncharacterized protein. (200 aa)
	A0A167QWU6	Uncharacterized protein. (693 aa)
	A0A167QHQ7	SNRNP27 domain-containing protein. (102 aa)
	A0A167Q5H4	DUF1716 domain-containing protein. (628 aa)
	A0A167Q3B2	Uncharacterized protein. (598 aa)
	A0A167PNK0	Ubiquitin-like domain-containing protein. (73 aa)
	A0A167P6Z6	Uncharacterized protein. (839 aa)
	A0A167NZG0	Uncharacterized protein. (226 aa)
	A0A167N3X8	Uncharacterized protein. (196 aa)
	PRP4	Serine/threonine protein kinase Prp4; Belongs to the protein kinase superfamily. (342 aa)
	A0A167MJU1	Uncharacterized protein. (499 aa)
	A0A167M8Y7	Uncharacterized protein. (698 aa)
	A0A167M7U4	WD_REPEATS_REGION domain-containing protein. (296 aa)
	A0A167LA13	Uncharacterized protein. (265 aa)
	A0A167L161	SMN domain-containing protein. (154 aa)
	A0A167KNG8	Uncharacterized protein. (248 aa)
	A0A163EH07	SGT1 transcription factor. (634 aa)
	A0A163E4S8	Uncharacterized protein. (656 aa)
	A0A163DYF8	G-patch domain-containing protein. (388 aa)
	A0A162ZXI0	G-patch domain-containing protein. (1001 aa)
	A0A162ZUR9	Tudor domain-containing protein. (258 aa)
	A0A162ZH95	Uncharacterized protein. (234 aa)
	A0A162WYS6	RRM domain-containing protein. (389 aa)
	A0A162WFJ6	Uncharacterized protein. (190 aa)
	A0A162V6T2	Uncharacterized protein. (147 aa)
	A0A162V5S0	Uncharacterized protein. (149 aa)
	A0A162V343	Uncharacterized protein. (422 aa)
	A0A162UZZ5	Uncharacterized protein. (461 aa)
	A0A162UVW1	Nuclear cap-binding protein subunit 2. (218 aa)
	A0A162UIL5	WD_REPEATS_REGION domain-containing protein. (360 aa)
	A0A162TJ34	Matrin-type domain-containing protein. (88 aa)
	A0A162TIG4	Uncharacterized protein. (182 aa)
	A0A162TGE1	Uncharacterized protein. (314 aa)
	A0A162Q426	RRM domain-containing protein. (201 aa)
	A0A162Q382	Uncharacterized protein. (598 aa)
	A0A162Q1B1	RRM domain-containing protein. (170 aa)
	A0A162PR71	J domain-containing protein. (225 aa)
	A0A162NGK1	Uncharacterized protein. (634 aa)
	A0A162N8H3	Matrin-type domain-containing protein. (469 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162N3L9	A0A162N8H3	A0A162N3L9	A0A162N8H3	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	Matrin-type domain-containing protein.	0.722
A0A162N3L9	A0A162NGK1	A0A162N3L9	A0A162NGK1	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	Uncharacterized protein.	0.444
A0A162N3L9	A0A162Q1B1	A0A162N3L9	A0A162Q1B1	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	RRM domain-containing protein.	0.904
A0A162N3L9	A0A162Q382	A0A162N3L9	A0A162Q382	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	Uncharacterized protein.	0.775
A0A162N3L9	A0A162UIL5	A0A162N3L9	A0A162UIL5	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	WD_REPEATS_REGION domain-containing protein.	0.922
A0A162N3L9	A0A162V5S0	A0A162N3L9	A0A162V5S0	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	Uncharacterized protein.	0.863
A0A162N3L9	A0A162WYS6	A0A162N3L9	A0A162WYS6	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	RRM domain-containing protein.	0.982
A0A162N3L9	A0A167KNG8	A0A162N3L9	A0A167KNG8	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	Uncharacterized protein.	0.923
A0A162N3L9	A0A167LA13	A0A162N3L9	A0A167LA13	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	Uncharacterized protein.	0.689
A0A162N3L9	A0A167M7U4	A0A162N3L9	A0A167M7U4	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	WD_REPEATS_REGION domain-containing protein.	0.677
A0A162N3L9	A0A167NZG0	A0A162N3L9	A0A167NZG0	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	Uncharacterized protein.	0.946
A0A162N3L9	A0A167PNK0	A0A162N3L9	A0A167PNK0	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	Ubiquitin-like domain-containing protein.	0.766
A0A162N3L9	A0A167Q5H4	A0A162N3L9	A0A167Q5H4	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	DUF1716 domain-containing protein.	0.689
A0A162N3L9	A0A167QWU6	A0A162N3L9	A0A167QWU6	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	Uncharacterized protein.	0.999
A0A162N8H3	A0A162N3L9	A0A162N8H3	A0A162N3L9	Matrin-type domain-containing protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.722
A0A162N8H3	A0A162NGK1	A0A162N8H3	A0A162NGK1	Matrin-type domain-containing protein.	Uncharacterized protein.	0.990
A0A162N8H3	A0A162PR71	A0A162N8H3	A0A162PR71	Matrin-type domain-containing protein.	J domain-containing protein.	0.475
A0A162N8H3	A0A162Q1B1	A0A162N8H3	A0A162Q1B1	Matrin-type domain-containing protein.	RRM domain-containing protein.	0.634
A0A162N8H3	A0A162Q382	A0A162N8H3	A0A162Q382	Matrin-type domain-containing protein.	Uncharacterized protein.	0.999
A0A162N8H3	A0A162Q426	A0A162N8H3	A0A162Q426	Matrin-type domain-containing protein.	RRM domain-containing protein.	0.545