(35 nodes) Animal organ development network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162N439	Uncharacterized protein. (268 aa)
	A0A167QXC5	Uncharacterized protein. (236 aa)
	A0A167QRN9	HMG box domain-containing protein. (408 aa)
	A0A167QHD0	Uncharacterized protein. (188 aa)
	A0A167QBI2	CP2 transcription factor. (504 aa)
	A0A167Q311	Uncharacterized protein. (173 aa)
	A0A167PNQ2	Uncharacterized protein. (121 aa)
	pkaC9	Protein kinase A catalytic subunit. (349 aa)
	A0A167PFV9	Thioredoxin domain-containing protein. (309 aa)
	A0A167P8B5	Uncharacterized protein. (779 aa)
	A0A167NN24	Uncharacterized protein. (206 aa)
	A0A167MRI0	Homeodomain-like DNA binding domain-containing transcription factor. (118 aa)
	A0A167MPP7	Homeodomain-like DNA binding domain-containing transcription factor. (340 aa)
	A0A167M7J7	LINES_N domain-containing protein. (519 aa)
	A0A167LWA9	EXPERA domain-containing protein. (212 aa)
	A0A167LU81	Uncharacterized protein. (1108 aa)
	A0A167KL44	TMF_TATA_bd domain-containing protein. (180 aa)
	A0A167JQG4	CS domain-containing protein. (284 aa)
	A0A167JLZ1	Uncharacterized protein. (234 aa)
	A0A163EJQ5	Uncharacterized protein. (443 aa)
	A0A163D0E4	Uncharacterized protein. (172 aa)
	A0A163BDZ9	Homeodomain-like DNA binding domain-containing transcription factor. (283 aa)
	A0A163BCR2	Uncharacterized protein. (791 aa)
	A0A163B4F4	Uncharacterized protein. (3376 aa)
	A0A162X2W0	Uncharacterized protein. (136 aa)
	A0A162WG30	Peptidase_M50 domain-containing protein. (571 aa)
	A0A162UJN5	Uncharacterized protein. (255 aa)
	A0A162TVA8	Homeodomain-like DNA binding domain-containing transcription factor. (58 aa)
	A0A162TPG2	HMG box domain-containing protein. (322 aa)
	A0A162TGD1	Uncharacterized protein. (1515 aa)
	A0A162TFA2	PlsC domain-containing protein. (806 aa)
	A0A162TCR0	NDK domain-containing protein; Belongs to the NDK family. (110 aa)
	A0A162PZ78	Zinc finger, A20-type transcription factor. (210 aa)
	A0A162PUA5	Uncharacterized protein. (166 aa)
	A0A162N632	Ubiquitin-like domain-containing protein. (458 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162TGD1	A0A163EJQ5	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A162TGD1	A0A167Q311	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A162TPG2	A0A167QRN9	HMG box domain-containing protein.	HMG box domain-containing protein.	0.706
A0A163D0E4	A0A163EJQ5	Uncharacterized protein.	Uncharacterized protein.	0.899
A0A163D0E4	A0A167Q311	Uncharacterized protein.	Uncharacterized protein.	0.899
A0A163EJQ5	A0A162TGD1	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A163EJQ5	A0A163D0E4	Uncharacterized protein.	Uncharacterized protein.	0.899
A0A167Q311	A0A162TGD1	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A167Q311	A0A163D0E4	Uncharacterized protein.	Uncharacterized protein.	0.899
A0A167QRN9	A0A162TPG2	HMG box domain-containing protein.	HMG box domain-containing protein.	0.706