(103 nodes) Organelle assembly network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162U7A8	Uncharacterized protein. (319 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (280 aa)
	A0A162UHN9	Spindle pole body component. (752 aa)
	A0A162UJN5	Uncharacterized protein. (255 aa)
	A0A162ULI7	Uncharacterized protein. (207 aa)
	A0A162UMT3	Brix domain-containing protein. (291 aa)
	A0A162UN62	CP-type G domain-containing protein. (672 aa)
	A0A162URC2	WD_REPEATS_REGION domain-containing protein. (904 aa)
	A0A162V0Z4	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (360 aa)
	A0A162V3F5	Uncharacterized protein. (387 aa)
	A0A162V4S8	Uncharacterized protein. (303 aa)
	A0A162V506	Uncharacterized protein. (327 aa)
	A0A162V573	Uncharacterized protein. (112 aa)
	A0A162V7T5	Uncharacterized protein. (480 aa)
	A0A162XN51	Uncharacterized protein. (243 aa)
	A0A162XND0	Uncharacterized protein. (206 aa)
	RPS0-2	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (283 aa)
	A0A162XT05	Uncharacterized protein. (234 aa)
	A0A162YFX8	C2H2-type zinc finger transcription factor. (65 aa)
	A0A162ZET0	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (340 aa)
	A0A162ZKR5	Uncharacterized protein. (1159 aa)
	A0A163AA86	Uncharacterized protein. (390 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (135 aa)
	A0A163AYY5	Uncharacterized protein. (428 aa)
	A0A163B2X5	Uncharacterized protein. (152 aa)
	A0A163B6G5	Uncharacterized protein. (301 aa)
	A0A163BBD1	WD_REPEATS_REGION domain-containing protein. (540 aa)
	A0A163BCR2	Uncharacterized protein. (791 aa)
	A0A163BD86	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (145 aa)
	A0A163D361	ATG11 domain-containing protein. (167 aa)
	A0A163DY65	Uncharacterized protein. (286 aa)
	A0A163DYX2	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (536 aa)
	A0A163E803	Ribosomal_L18_c domain-containing protein. (293 aa)
	A0A163EKL6	Uncharacterized protein. (217 aa)
	A0A167JJP4	Uncharacterized protein. (226 aa)
	A0A167K0X1	Uncharacterized protein. (203 aa)
	A0A167K4X1	Uncharacterized protein. (446 aa)
	A0A167KFM0	Uncharacterized protein. (655 aa)
	A0A167KL44	TMF_TATA_bd domain-containing protein. (180 aa)
	A0A167L0X3	Uncharacterized protein. (858 aa)
	A0A167L6E4	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (137 aa)
	A0A167LC35	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (224 aa)
	A0A167LER2	LsmAD domain-containing protein. (829 aa)
	A0A167LZE4	Uncharacterized protein. (147 aa)
	A0A167M5G2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (310 aa)
	A0A167MR25	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	A0A167MYM1	Uncharacterized protein. (207 aa)
	A0A167N1N9	Ribosomal_L18_c domain-containing protein. (294 aa)
	A0A167N5B1	Ribosomal_L16 domain-containing protein. (216 aa)
	A0A167N761	YjeF N-terminal domain-containing protein. (227 aa)
	A0A167NA46	DUF667 domain-containing protein. (208 aa)
	A0A167NJP4	Uncharacterized protein. (207 aa)
	A0A167NRC2	Uncharacterized protein. (196 aa)
	A0A167NS43	40S ribosomal protein S27. (84 aa)
	A0A167NWS2	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (85 aa)
	A0A167P1W3	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (223 aa)
	A0A167P465	Uncharacterized protein. (390 aa)
	A0A167P9B8	Uncharacterized protein. (195 aa)
	A0A167PAF3	Ribosomal_L18_c domain-containing protein. (286 aa)
	A0A167PFH1	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (538 aa)
	A0A167PH19	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	A0A167PIH9	Uncharacterized protein. (203 aa)
	A0A167PSM1	Exonuclease domain-containing protein. (169 aa)
	A0A167PUG1	Uncharacterized protein. (161 aa)
	A0A167PWY0	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (148 aa)
	A0A167PY87	TPR_REGION domain-containing protein. (188 aa)
	A0A167Q2A2	40S ribosomal protein S27. (84 aa)
	A0A167Q6E0	Uncharacterized protein. (204 aa)
	A0A167Q814	Uncharacterized protein. (1478 aa)
	A0A167Q9N0	Tr-type G domain-containing protein. (1053 aa)
	RPS0-3	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (280 aa)
	A0A167QFQ2	Uncharacterized protein. (146 aa)
	A0A167QTH7	Uncharacterized protein. (1451 aa)
	A0A167QV90	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (4023 aa)
	A0A167QVM0	Uncharacterized protein. (484 aa)
	A0A167QZD7	40S ribosomal protein S27. (84 aa)
	A0A167R2V5	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (431 aa)
	A0A167R3N0	CENP-T_C domain-containing protein. (575 aa)
	A0A167RCD3	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (525 aa)
	A0A167REX1	WD_REPEATS_REGION domain-containing protein. (433 aa)
	A0A162N6R1	Uncharacterized protein. (510 aa)
	A0A162N8M0	Helix-loop-helix DNA-binding domain-containing transcription factor. (621 aa)
	A0A162N8T6	Uncharacterized protein. (206 aa)
	A0A162NH72	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (284 aa)
	A0A162NHB2	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (86 aa)
	A0A162NI19	Uncharacterized protein. (265 aa)
	A0A162NJP1	W2 domain-containing protein. (382 aa)
	A0A162NM52	Uncharacterized protein. (884 aa)
	A0A162PQ90	Spindle pole body component. (966 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (245 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (105 aa)
	A0A162PWG7	Uncharacterized protein. (383 aa)
	A0A162PWU7	Uncharacterized protein. (145 aa)
	A0A162PYG2	Protein kinase domain-containing protein. (901 aa)
	A0A162PZN3	Spindle pole body component. (813 aa)
	A0A162T184	Uncharacterized protein. (272 aa)
	A0A162TB98	Uncharacterized protein. (650 aa)
	A0A162TCR0	NDK domain-containing protein; Belongs to the NDK family. (110 aa)
	A0A162TIK7	Uncharacterized protein. (98 aa)
	A0A162TPW3	Uncharacterized protein. (209 aa)
	A0A162TQ13	Uncharacterized protein. (296 aa)
	A0A162TRI9	WD_REPEATS_REGION domain-containing protein. (467 aa)
	A0A162TV89	Brix domain-containing protein. (323 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162N6R1	A0A167K4X1	A0A162N6R1	A0A167K4X1	Uncharacterized protein.	Uncharacterized protein.	0.820
A0A162N6R1	A0A167L0X3	A0A162N6R1	A0A167L0X3	Uncharacterized protein.	Uncharacterized protein.	0.969
A0A162N6R1	A0A167LER2	A0A162N6R1	A0A167LER2	Uncharacterized protein.	LsmAD domain-containing protein.	0.461
A0A162N6R1	LSM3	A0A162N6R1	A0A162PW05	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.847
A0A162N6R1	LSM4	A0A162N6R1	A0A163AVZ5	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.878
A0A162N8M0	A0A162NHB2	A0A162N8M0	A0A162NHB2	Helix-loop-helix DNA-binding domain-containing transcription factor.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	0.461
A0A162N8M0	A0A162PYG2	A0A162N8M0	A0A162PYG2	Helix-loop-helix DNA-binding domain-containing transcription factor.	Protein kinase domain-containing protein.	0.998
A0A162N8M0	A0A163BBD1	A0A162N8M0	A0A163BBD1	Helix-loop-helix DNA-binding domain-containing transcription factor.	WD_REPEATS_REGION domain-containing protein.	0.461
A0A162N8M0	A0A167JJP4	A0A162N8M0	A0A167JJP4	Helix-loop-helix DNA-binding domain-containing transcription factor.	Uncharacterized protein.	0.988
A0A162N8M0	A0A167QV90	A0A162N8M0	A0A167QV90	Helix-loop-helix DNA-binding domain-containing transcription factor.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.747
A0A162N8T6	A0A162PYG2	A0A162N8T6	A0A162PYG2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.582
A0A162N8T6	A0A162TB98	A0A162N8T6	A0A162TB98	Uncharacterized protein.	Uncharacterized protein.	0.736
A0A162N8T6	A0A162ULI7	A0A162N8T6	A0A162ULI7	Uncharacterized protein.	Uncharacterized protein.	0.799
A0A162N8T6	A0A162XND0	A0A162N8T6	A0A162XND0	Uncharacterized protein.	Uncharacterized protein.	0.722
A0A162N8T6	A0A163BBD1	A0A162N8T6	A0A163BBD1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.821
A0A162N8T6	A0A167MR25	A0A162N8T6	A0A167MR25	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.600
A0A162N8T6	A0A167MYM1	A0A162N8T6	A0A167MYM1	Uncharacterized protein.	Uncharacterized protein.	0.721
A0A162N8T6	A0A167NJP4	A0A162N8T6	A0A167NJP4	Uncharacterized protein.	Uncharacterized protein.	0.799
A0A162N8T6	A0A167Q6E0	A0A162N8T6	A0A167Q6E0	Uncharacterized protein.	Uncharacterized protein.	0.800
A0A162N8T6	A0A167Q814	A0A162N8T6	A0A167Q814	Uncharacterized protein.	Uncharacterized protein.	0.960