(40 nodes) Mitotic nuclear division network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A167N8N2	Cullin; Belongs to the cullin family. (433 aa)
	A0A163D5U6	Sister chromatid cohesion protein. (1601 aa)
	A0A163B9B4	Cnd1 domain-containing protein. (1129 aa)
	A0A163B7M8	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (306 aa)
	A0A163AYY5	Uncharacterized protein. (428 aa)
	A0A162ZET0	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (340 aa)
	A0A162YG10	SMC hinge domain-containing protein. (1152 aa)
	A0A162YFX8	C2H2-type zinc finger transcription factor. (65 aa)
	A0A162Y7E4	Uncharacterized protein. (696 aa)
	A0A162XT05	Uncharacterized protein. (234 aa)
	A0A162XN51	Uncharacterized protein. (243 aa)
	A0A162WRV1	Uncharacterized protein. (862 aa)
	A0A162V506	Uncharacterized protein. (327 aa)
	A0A162V3T3	Cnd3 domain-containing protein. (773 aa)
	A0A162V0Z4	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (360 aa)
	A0A162UJ56	Uncharacterized protein. (368 aa)
	A0A162U963	Uncharacterized protein. (380 aa)
	A0A162U643	Csm1 domain-containing protein. (289 aa)
	A0A162TW40	Uncharacterized protein. (506 aa)
	Plo1	Serine/threonine protein kinase. (249 aa)
	A0A162T6E8	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. (761 aa)
	A0A162T184	Uncharacterized protein. (272 aa)
	A0A162PY93	Uncharacterized protein. (259 aa)
	A0A162PUR4	Uncharacterized protein. (625 aa)
	A0A162PME0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (414 aa)
	A0A162PLA4	Uncharacterized protein. (283 aa)
	A0A162NJQ6	Uncharacterized protein. (689 aa)
	A0A162NH72	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (284 aa)
	A0A167R3N0	CENP-T_C domain-containing protein. (575 aa)
	A0A167QT68	Uncharacterized protein. (130 aa)
	A0A167P4J6	Uncharacterized protein. (289 aa)
	A0A167P465	Uncharacterized protein. (390 aa)
	A0A163ELH4	Uncharacterized protein. (227 aa)
	A0A167JGY5	PCI domain-containing protein. (499 aa)
	A0A167JJT4	Structural maintenance of chromosomes protein. (1228 aa)
	A0A167KF97	Uncharacterized protein. (513 aa)
	A0A167KYX3	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1184 aa)
	A0A167LF20	Spindle pole body component. (956 aa)
	A0A167LHR5	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (300 aa)
	A0A167MNC4	UmuC domain-containing protein. (609 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162NH72	A0A162NJQ6	A0A162NH72	A0A162NJQ6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.410
A0A162NH72	A0A162PME0	A0A162NH72	A0A162PME0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.996
A0A162NH72	A0A162T184	A0A162NH72	A0A162T184	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.666
A0A162NH72	A0A162T6E8	A0A162NH72	A0A162T6E8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.	0.880
A0A162NH72	A0A162TW40	A0A162NH72	A0A162TW40	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.442
A0A162NH72	A0A162UJ56	A0A162NH72	A0A162UJ56	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.487
A0A162NH72	A0A162V3T3	A0A162NH72	A0A162V3T3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Cnd3 domain-containing protein.	0.919
A0A162NH72	A0A162V506	A0A162NH72	A0A162V506	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.460
A0A162NH72	A0A162WRV1	A0A162NH72	A0A162WRV1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.670
A0A162NH72	A0A162XN51	A0A162NH72	A0A162XN51	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.536
A0A162NH72	A0A162XT05	A0A162NH72	A0A162XT05	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.460
A0A162NH72	A0A162Y7E4	A0A162NH72	A0A162Y7E4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.450
A0A162NH72	A0A162YG10	A0A162NH72	A0A162YG10	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	SMC hinge domain-containing protein.	0.420
A0A162NH72	A0A163AYY5	A0A162NH72	A0A163AYY5	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.596
A0A162NH72	A0A167JJT4	A0A162NH72	A0A167JJT4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Structural maintenance of chromosomes protein.	0.407
A0A162NH72	A0A167KYX3	A0A162NH72	A0A167KYX3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.874
A0A162NH72	A0A167LF20	A0A162NH72	A0A167LF20	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Spindle pole body component.	0.442
A0A162NH72	A0A167MNC4	A0A162NH72	A0A167MNC4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	UmuC domain-containing protein.	0.722
A0A162NH72	A0A167P4J6	A0A162NH72	A0A167P4J6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.433
A0A162NH72	Plo1	A0A162NH72	A0A162TVH4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Serine/threonine protein kinase.	0.850