(97 nodes) Regulation of intracellular signal transduction network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A167KFC3	WD_REPEATS_REGION domain-containing protein. (316 aa)
	A0A167KHS2	Uncharacterized protein. (1438 aa)
	A0A167KJZ3	Uncharacterized protein. (142 aa)
	A0A167KZK5	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (110 aa)
	A0A167KZU6	Uncharacterized protein. (250 aa)
	A0A167KZV4	Uncharacterized protein. (264 aa)
	A0A167L2Z9	TYR_PHOSPHATASE_2 domain-containing protein. (176 aa)
	A0A167L7D5	Serine/threonine kinase hybrid HK. (2227 aa)
	A0A167LHG5	Zinc_ribbon_16 domain-containing protein. (1060 aa)
	A0A167MGA0	Rap-GAP domain-containing protein. (2090 aa)
	A0A167MH44	WD_REPEATS_REGION domain-containing protein. (316 aa)
	A0A167MIX2	Rho-GAP domain-containing protein. (412 aa)
	A0A167MSP2	Uncharacterized protein. (1053 aa)
	A0A167NAW5	Rho-GAP domain-containing protein. (198 aa)
	A0A167NFW3	Uncharacterized protein. (308 aa)
	A0A167NJR4	Uncharacterized protein. (498 aa)
	A0A167NN24	Uncharacterized protein. (206 aa)
	A0A167NP63	RBR-type E3 ubiquitin transferase. (471 aa)
	A0A167P2U0	Uncharacterized protein. (943 aa)
	A0A167P526	Uncharacterized protein. (406 aa)
	A0A167P6B2	Methyltranfer_dom domain-containing protein. (474 aa)
	A0A167PBV0	Uncharacterized protein. (457 aa)
	A0A167PD69	Methyltranfer_dom domain-containing protein. (471 aa)
	A0A167PQG1	Uncharacterized protein. (832 aa)
	A0A167PR87	Uncharacterized protein. (117 aa)
	A0A167Q569	Uncharacterized protein. (1411 aa)
	A0A167QFR0	Protein kinase domain-containing protein. (1089 aa)
	A0A167QKR5	Integrase_H2C2 domain-containing protein. (608 aa)
	A0A167QM81	Uncharacterized protein. (263 aa)
	HK_IC	Type IC hybrid histidine kinase. (913 aa)
	A0A167QW28	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (349 aa)
	A0A167R0R6	Uncharacterized protein. (183 aa)
	NDUFA13	NADH dehydrogenase 1 alpha subcomplex subunit 13 NDUFA13/GRIM19. (128 aa)
	A0A167R601	Uncharacterized protein. (517 aa)
	A0A167RDE1	Uncharacterized protein. (451 aa)
	A0A163CUS5	Uncharacterized protein. (259 aa)
	A0A163B4F4	Uncharacterized protein. (3376 aa)
	A0A163B1A4	Uncharacterized protein. (745 aa)
	A0A163ARR6	Robl_LC7 domain-containing protein. (107 aa)
	A0A163AB40	Uncharacterized protein. (447 aa)
	A0A162YAK8	PH domain-containing protein. (247 aa)
	A0A162Y7E1	Ras-GAP domain-containing protein. (799 aa)
	A0A162XNE7	Rho-GAP domain-containing protein. (77 aa)
	A0A162XG32	Uncharacterized protein. (213 aa)
	A0A162X9S5	Uncharacterized protein. (853 aa)
	A0A162UZ29	Uncharacterized protein. (971 aa)
	A0A162UYJ6	PH_9 domain-containing protein. (238 aa)
	A0A162UXF6	WD_REPEATS_REGION domain-containing protein. (738 aa)
	A0A162UW63	UDENN domain-containing protein. (1072 aa)
	A0A162UUM8	FH2 domain-containing protein. (207 aa)
	A0A162UNK1	Uncharacterized protein. (480 aa)
	A0A162UJ98	RBR-type E3 ubiquitin transferase. (370 aa)
	A0A162UA44	Integrase_H2C2 domain-containing protein. (490 aa)
	A0A162U6U5	RBR-type E3 ubiquitin transferase. (518 aa)
	A0A162U0M3	Uncharacterized protein. (623 aa)
	A0A162TZ76	Integrase_H2C2 domain-containing protein. (349 aa)
	A0A162TYU3	Uncharacterized protein. (566 aa)
	A0A162TY02	Uncharacterized protein. (1039 aa)
	A0A162TW34	Rap-GAP domain-containing protein. (1622 aa)
	Plo1	Serine/threonine protein kinase. (249 aa)
	A0A162TV20	Rab-GAP TBC domain-containing protein. (369 aa)
	A0A162TRM8	FHA domain-containing protein. (159 aa)
	A0A162THR2	Uncharacterized protein. (736 aa)
	A0A162TCR0	NDK domain-containing protein; Belongs to the NDK family. (110 aa)
	A0A162TBW3	Rap-GAP domain-containing protein. (864 aa)
	A0A162TB98	Uncharacterized protein. (650 aa)
	A0A162Q6F1	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (309 aa)
	A0A162Q5F3	Rap-GAP domain-containing protein. (1211 aa)
	A0A162PYZ7	Uncharacterized protein. (155 aa)
	A0A162PYT5	Rap-GAP domain-containing protein. (1437 aa)
	A0A162PYE1	Uncharacterized protein. (961 aa)
	A0A162PXM7	SEC7 domain-containing protein. (1766 aa)
	A0A162PRR7	PPM-type phosphatase domain-containing protein. (270 aa)
	A0A162PRI3	Uncharacterized protein. (357 aa)
	A0A162PQN9	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (431 aa)
	STKc	Serine/threonine kinase hybrid HK. (2627 aa)
	A0A162PLK9	Uncharacterized protein. (1274 aa)
	A0A162PIT1	Rap-GAP domain-containing protein. (923 aa)
	A0A162NGZ0	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (437 aa)
	A0A162NG38	Uncharacterized protein. (240 aa)
	A0A162NFZ4	PH domain-containing protein. (82 aa)
	A0A162N9L2	OTU domain-containing protein. (149 aa)
	A0A162N8V3	Uncharacterized protein. (679 aa)
	A0A167KBD5	Uncharacterized protein. (300 aa)
	A0A167K5I1	CNH domain-containing protein. (930 aa)
	A0A167K4U9	Uncharacterized protein. (827 aa)
	A0A167JXY3	Ras-GAP domain-containing protein. (821 aa)
	A0A167JQ01	SEC7 domain-containing protein. (1258 aa)
	A0A167JPZ2	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (446 aa)
	A0A167JLP9	Uncharacterized protein. (314 aa)
	A0A167JJW8	Uncharacterized protein. (186 aa)
	A0A167JHU2	SEC7 domain-containing protein. (425 aa)
	A0A163DZD5	Uncharacterized protein. (401 aa)
	A0A163DY06	Uncharacterized protein. (409 aa)
	A0A163DNI4	Uncharacterized protein. (205 aa)
	A0A163D646	Ras-GAP domain-containing protein. (803 aa)
	A0A163D5T0	Serine/threonine kinase hybrid. (2370 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162N8V3	A0A162TV20	A0A162N8V3	A0A162TV20	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.480
A0A162N9L2	A0A167JLP9	A0A162N9L2	A0A167JLP9	OTU domain-containing protein.	Uncharacterized protein.	0.814
A0A162N9L2	A0A167PR87	A0A162N9L2	A0A167PR87	OTU domain-containing protein.	Uncharacterized protein.	0.566
A0A162NFZ4	A0A162PXM7	A0A162NFZ4	A0A162PXM7	PH domain-containing protein.	SEC7 domain-containing protein.	0.667
A0A162NFZ4	A0A167JHU2	A0A162NFZ4	A0A167JHU2	PH domain-containing protein.	SEC7 domain-containing protein.	0.616
A0A162NFZ4	A0A167JQ01	A0A162NFZ4	A0A167JQ01	PH domain-containing protein.	SEC7 domain-containing protein.	0.710
A0A162NFZ4	A0A167PQG1	A0A162NFZ4	A0A167PQG1	PH domain-containing protein.	Uncharacterized protein.	0.640
A0A162NG38	A0A162TV20	A0A162NG38	A0A162TV20	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.480
A0A162NGZ0	A0A162TV20	A0A162NGZ0	A0A162TV20	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Rab-GAP TBC domain-containing protein.	0.881
A0A162NGZ0	Plo1	A0A162NGZ0	A0A162TVH4	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Serine/threonine protein kinase.	0.907
A0A162PIT1	A0A162PYT5	A0A162PIT1	A0A162PYT5	Rap-GAP domain-containing protein.	Rap-GAP domain-containing protein.	0.679
A0A162PLK9	A0A163B1A4	A0A162PLK9	A0A163B1A4	Uncharacterized protein.	Uncharacterized protein.	0.535
A0A162PQN9	A0A162TV20	A0A162PQN9	A0A162TV20	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Rab-GAP TBC domain-containing protein.	0.881
A0A162PQN9	Plo1	A0A162PQN9	A0A162TVH4	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Serine/threonine protein kinase.	0.907
A0A162PRI3	A0A162TV20	A0A162PRI3	A0A162TV20	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.480
A0A162PRR7	A0A162TCR0	A0A162PRR7	A0A162TCR0	PPM-type phosphatase domain-containing protein.	NDK domain-containing protein; Belongs to the NDK family.	0.452
A0A162PRR7	A0A162UNK1	A0A162PRR7	A0A162UNK1	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.765
A0A162PXM7	A0A162NFZ4	A0A162PXM7	A0A162NFZ4	SEC7 domain-containing protein.	PH domain-containing protein.	0.667
A0A162PXM7	A0A162UYJ6	A0A162PXM7	A0A162UYJ6	SEC7 domain-containing protein.	PH_9 domain-containing protein.	0.667
A0A162PXM7	A0A162YAK8	A0A162PXM7	A0A162YAK8	SEC7 domain-containing protein.	PH domain-containing protein.	0.667