(28 nodes) DNA repair complex network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162N8Y0	DNA_mis_repair domain-containing protein. (363 aa)
	A0A162T700	Uncharacterized protein. (641 aa)
	A0A162TGD1	Uncharacterized protein. (1515 aa)
	A0A162U6T4	Uncharacterized protein. (853 aa)
	A0A162UDA2	Uncharacterized protein. (239 aa)
	A0A162W711	DDE_Tnp_IS1595 domain-containing protein. (322 aa)
	A0A162WCQ6	UBA domain-containing protein. (190 aa)
	A0A162WSS2	Uncharacterized protein. (1340 aa)
	A0A162X8R1	Helicase ATP-binding domain-containing protein. (767 aa)
	A0A162Z921	DDE_Tnp_IS1595 domain-containing protein. (319 aa)
	A0A162ZI85	DDE_Tnp_IS1595 domain-containing protein. (151 aa)
	A0A162ZJ50	Uncharacterized protein. (419 aa)
	A0A163D119	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (929 aa)
	A0A163E984	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (931 aa)
	A0A167JHW9	ERCC4 domain-containing protein. (893 aa)
	A0A167K307	MutL_C domain-containing protein. (759 aa)
	A0A167KVA2	DNA_mis_repair domain-containing protein. (687 aa)
	A0A167M9L1	MutL_C domain-containing protein. (218 aa)
	A0A167NCY6	Uncharacterized protein. (201 aa)
	A0A167NGF0	Uncharacterized protein. (562 aa)
	A0A167NIV2	Uncharacterized protein. (1091 aa)
	A0A167P8R7	Uncharacterized protein. (809 aa)
	A0A167Q470	DDE_Tnp_IS1595 domain-containing protein. (145 aa)
	A0A167QBC9	Uncharacterized protein. (754 aa)
	A0A167QNA6	DNA-binding transcription regulator. (286 aa)
	A0A167QV27	DDE_Tnp_IS1595 domain-containing protein. (189 aa)
	A0A167QV90	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (4023 aa)
	A0A167QYE2	DNA_mis_repair domain-containing protein. (677 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162N8Y0	A0A162U6T4	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.902
A0A162N8Y0	A0A162UDA2	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.405
A0A162N8Y0	A0A162X8R1	DNA_mis_repair domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.542
A0A162N8Y0	A0A163D119	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.992
A0A162N8Y0	A0A163E984	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.988
A0A162N8Y0	A0A167K307	DNA_mis_repair domain-containing protein.	MutL_C domain-containing protein.	0.764
A0A162N8Y0	A0A167KVA2	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.977
A0A162N8Y0	A0A167M9L1	DNA_mis_repair domain-containing protein.	MutL_C domain-containing protein.	0.951
A0A162N8Y0	A0A167NIV2	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.714
A0A162N8Y0	A0A167P8R7	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.687
A0A162N8Y0	A0A167QNA6	DNA_mis_repair domain-containing protein.	DNA-binding transcription regulator.	0.448
A0A162N8Y0	A0A167QYE2	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.978
A0A162T700	A0A162UDA2	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A162T700	A0A162WCQ6	Uncharacterized protein.	UBA domain-containing protein.	0.559
A0A162T700	A0A162X8R1	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.404
A0A162T700	A0A163D119	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.521
A0A162T700	A0A163E984	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.690
A0A162T700	A0A167JHW9	Uncharacterized protein.	ERCC4 domain-containing protein.	0.461
A0A162T700	A0A167NGF0	Uncharacterized protein.	Uncharacterized protein.	0.876
A0A162T700	A0A167NIV2	Uncharacterized protein.	Uncharacterized protein.	0.543