(19 nodes) Condensed nuclear chromosome network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A167LCF6	Uncharacterized protein. (580 aa)
	A0A167P4J6	Uncharacterized protein. (289 aa)
	A0A167P3T5	Uncharacterized protein. (92 aa)
	A0A167NBI7	Uncharacterized protein. (78 aa)
	A0A167MSD6	Uncharacterized protein. (200 aa)
	A0A167L451	Checkpoint protein; Belongs to the HUS1 family. (271 aa)
	A0A167KMD1	RING-type domain-containing protein. (260 aa)
	A0A167JF02	Uncharacterized protein. (114 aa)
	A0A163EG91	Uncharacterized protein. (106 aa)
	A0A163E7C7	Uncharacterized protein. (1152 aa)
	A0A163DIK2	Uncharacterized protein. (209 aa)
	A0A163B9B4	Cnd1 domain-containing protein. (1129 aa)
	A0A163B643	Uncharacterized protein. (178 aa)
	A0A162YG10	SMC hinge domain-containing protein. (1152 aa)
	A0A162Y083	Uncharacterized protein. (194 aa)
	A0A162XTE5	Uncharacterized protein. (618 aa)
	A0A162XJI2	Uncharacterized protein. (292 aa)
	A0A162X6K2	Ubiquitin-like domain-containing protein. (96 aa)
	A0A162UUM4	Uncharacterized protein; Belongs to the RecA family. (356 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162UUM4	A0A162X6K2	Uncharacterized protein; Belongs to the RecA family.	Ubiquitin-like domain-containing protein.	0.589
A0A162UUM4	A0A162XJI2	Uncharacterized protein; Belongs to the RecA family.	Uncharacterized protein.	0.657
A0A162UUM4	A0A162XTE5	Uncharacterized protein; Belongs to the RecA family.	Uncharacterized protein.	0.586
A0A162UUM4	A0A162YG10	Uncharacterized protein; Belongs to the RecA family.	SMC hinge domain-containing protein.	0.612
A0A162UUM4	A0A167L451	Uncharacterized protein; Belongs to the RecA family.	Checkpoint protein; Belongs to the HUS1 family.	0.516
A0A162UUM4	A0A167LCF6	Uncharacterized protein; Belongs to the RecA family.	Uncharacterized protein.	0.645
A0A162X6K2	A0A162UUM4	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the RecA family.	0.589
A0A162X6K2	A0A162YG10	Ubiquitin-like domain-containing protein.	SMC hinge domain-containing protein.	0.879
A0A162X6K2	A0A167KMD1	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.546
A0A162X6K2	A0A167LCF6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.704
A0A162XJI2	A0A162UUM4	Uncharacterized protein.	Uncharacterized protein; Belongs to the RecA family.	0.657
A0A162XJI2	A0A167L451	Uncharacterized protein.	Checkpoint protein; Belongs to the HUS1 family.	0.992
A0A162XTE5	A0A162UUM4	Uncharacterized protein.	Uncharacterized protein; Belongs to the RecA family.	0.586
A0A162XTE5	A0A167L451	Uncharacterized protein.	Checkpoint protein; Belongs to the HUS1 family.	0.983
A0A162Y083	A0A167P3T5	Uncharacterized protein.	Uncharacterized protein.	0.907
A0A162Y083	A0A167P4J6	Uncharacterized protein.	Uncharacterized protein.	0.887
A0A162YG10	A0A162UUM4	SMC hinge domain-containing protein.	Uncharacterized protein; Belongs to the RecA family.	0.612
A0A162YG10	A0A162X6K2	SMC hinge domain-containing protein.	Ubiquitin-like domain-containing protein.	0.879
A0A162YG10	A0A163B9B4	SMC hinge domain-containing protein.	Cnd1 domain-containing protein.	0.991
A0A162YG10	A0A167LCF6	SMC hinge domain-containing protein.	Uncharacterized protein.	0.989