(19 nodes) Cortical endoplasmic reticulum network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A167P2B0	Uncharacterized protein. (1411 aa)
	A0A167PM02	Uncharacterized protein. (1327 aa)
	A0A167QBE1	Uncharacterized protein. (554 aa)
	A0A167R7B1	Uncharacterized protein; Belongs to the OSBP family. (402 aa)
	A0A162NH37	VASt domain-containing protein. (780 aa)
	A0A162U8B1	VASt domain-containing protein. (725 aa)
	A0A162UQA7	Uncharacterized protein. (1253 aa)
	A0A162UXK1	Uncharacterized protein. (1222 aa)
	A0A162UZ77	Uncharacterized protein. (1321 aa)
	A0A162X2I9	Uncharacterized protein; Belongs to the OSBP family. (359 aa)
	A0A162YJA1	Uncharacterized protein. (202 aa)
	A0A163AK08	Uncharacterized protein. (771 aa)
	SEY1	Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. (776 aa)
	A0A163DKZ7	Uncharacterized protein. (225 aa)
	A0A167L7M5	Uncharacterized protein. (1449 aa)
	A0A167LKU7	Uncharacterized protein. (802 aa)
	A0A167M7F2	Uncharacterized protein. (844 aa)
	A0A167N801	Uncharacterized protein. (1434 aa)
	A0A167P065	CRAL-TRIO domain-containing protein. (353 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162X2I9	A0A163AK08	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein.	0.606
A0A162X2I9	A0A167P065	Uncharacterized protein; Belongs to the OSBP family.	CRAL-TRIO domain-containing protein.	0.435
A0A163AK08	A0A162X2I9	Uncharacterized protein.	Uncharacterized protein; Belongs to the OSBP family.	0.606
A0A163AK08	A0A167R7B1	Uncharacterized protein.	Uncharacterized protein; Belongs to the OSBP family.	0.606
A0A167P065	A0A162X2I9	CRAL-TRIO domain-containing protein.	Uncharacterized protein; Belongs to the OSBP family.	0.435
A0A167P065	A0A167R7B1	CRAL-TRIO domain-containing protein.	Uncharacterized protein; Belongs to the OSBP family.	0.435
A0A167R7B1	A0A163AK08	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein.	0.606
A0A167R7B1	A0A167P065	Uncharacterized protein; Belongs to the OSBP family.	CRAL-TRIO domain-containing protein.	0.435