(74 nodes) Nucleic acid-binding, OB-fold network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162N370	Uncharacterized protein. (258 aa)
	A0A162N3R5	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (125 aa)
	A0A162N887	RNB domain-containing protein. (952 aa)
	A0A162N8K8	Uncharacterized protein. (807 aa)
	A0A162N9T5	AAA domain-containing protein; Belongs to the AAA ATPase family. (439 aa)
	A0A162NC51	Uncharacterized protein. (1062 aa)
	A0A162NDE4	Uncharacterized protein. (249 aa)
	A0A162NGA9	AAA domain-containing protein; Belongs to the AAA ATPase family. (434 aa)
	A0A162NH30	Uncharacterized protein. (234 aa)
	A0A162NHM1	Uncharacterized protein. (211 aa)
	A0A162NIE4	AAA domain-containing protein; Belongs to the AAA ATPase family. (438 aa)
	A0A162NJ68	AAA domain-containing protein; Belongs to the AAA ATPase family. (429 aa)
	A0A162NPM3	S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (138 aa)
	A0A162PQ94	AA_TRNA_LIGASE_II domain-containing protein. (548 aa)
	A0A162PT24	Uncharacterized protein. (257 aa)
	A0A162PZK1	RNB domain-containing protein. (858 aa)
	A0A162Q1V6	Ribosomal_L2_C domain-containing protein. (253 aa)
	A0A162Q3C7	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	A0A162Q5T4	Uncharacterized protein. (503 aa)
	A0A162Q672	AAA domain-containing protein; Belongs to the AAA ATPase family. (400 aa)
	A0A162TCK3	Uncharacterized protein. (104 aa)
	A0A162TIV7	Cold-shock transcription factor. (190 aa)
	A0A162TQR7	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (151 aa)
	A0A162TTU4	Uncharacterized protein. (314 aa)
	A0A162TTX5	Uncharacterized protein. (265 aa)
	A0A162U5B4	Uncharacterized protein. (335 aa)
	A0A162U944	DNA ligase. (639 aa)
	A0A162UAK5	Uncharacterized protein; Belongs to the RNR ribonuclease family. (970 aa)
	A0A162UJ09	DNA_LIGASE_A3 domain-containing protein. (353 aa)
	MCM7	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (744 aa)
	A0A162UQ09	Lysine--tRNA ligase. (480 aa)
	A0A162UQI2	tRNA-binding domain-containing protein. (136 aa)
	A0A162UX06	AA_TRNA_LIGASE_II domain-containing protein. (481 aa)
	A0A162V0T7	AAA domain-containing protein; Belongs to the AAA ATPase family. (401 aa)
	A0A162V2U8	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (880 aa)
	A0A162W8K7	Zf-primase domain-containing protein. (439 aa)
	A0A162WXS4	Uncharacterized protein. (161 aa)
	A0A162WYP1	AA_TRNA_LIGASE_II domain-containing protein. (566 aa)
	A0A162X4Y2	Uncharacterized protein. (118 aa)
	A0A162ZRQ3	Uncharacterized protein. (142 aa)
	A0A162ZY31	Uncharacterized protein. (171 aa)
	A0A163A527	S1-like domain-containing protein. (150 aa)
	A0A163A803	S1 motif domain-containing protein. (191 aa)
	A0A163ABV4	Lysine--tRNA ligase. (571 aa)
	A0A163BFW3	RNB domain-containing protein. (1523 aa)
	A0A163BG53	DNA helicase; Belongs to the MCM family. (742 aa)
	A0A163D3B3	Uncharacterized protein. (82 aa)
	A0A163DUP1	AAA domain-containing protein; Belongs to the AAA ATPase family. (428 aa)
	A0A163E9Z4	Eukaryotic translation initiation factor 5A. (157 aa)
	A0A163EEJ7	AA_TRNA_LIGASE_II domain-containing protein. (662 aa)
	A0A167K7U7	DNA helicase; Belongs to the MCM family. (724 aa)
	A0A167KHW9	Uncharacterized protein. (642 aa)
	A0A167KK08	Ribosomal_L2_C domain-containing protein. (284 aa)
	A0A167KX96	Uncharacterized protein. (224 aa)
	A0A167L178	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (601 aa)
	A0A167LNU3	RNB domain-containing protein. (886 aa)
	A0A167LV55	Uncharacterized protein. (517 aa)
	A0A167MI67	AAA domain-containing protein; Belongs to the AAA ATPase family. (392 aa)
	A0A167N541	RNB domain-containing protein. (711 aa)
	A0A167N7L9	Uncharacterized protein. (171 aa)
	A0A167N8A1	AAA domain-containing protein; Belongs to the AAA ATPase family. (411 aa)
	A0A167NGS3	tRNA-binding domain-containing protein. (170 aa)
	A0A167NUK9	S1 motif domain-containing protein. (1318 aa)
	A0A167P240	DNA helicase; Belongs to the MCM family. (808 aa)
	A0A167P8K4	DNA helicase; Belongs to the MCM family. (850 aa)
	A0A167PHZ8	S1 motif domain-containing protein. (312 aa)
	A0A167Q2C7	DNA helicase; Belongs to the MCM family. (902 aa)
	A0A167Q7W4	Cold-shock transcription factor. (208 aa)
	A0A167QTH7	Uncharacterized protein. (1451 aa)
	A0A167QVL4	Uncharacterized protein. (68 aa)
	A0A167QYT3	RNB domain-containing protein; Belongs to the RNR ribonuclease family. (957 aa)
	A0A167R180	Eukaryotic translation initiation factor 5A. (158 aa)
	A0A167R3S1	Uncharacterized protein. (114 aa)
	A0A167R8X4	Stn1 domain-containing protein. (342 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162N370	A0A162N3R5	A0A162N370	A0A162N3R5	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.461
A0A162N370	A0A162N887	A0A162N370	A0A162N887	Uncharacterized protein.	RNB domain-containing protein.	0.905
A0A162N370	A0A162NH30	A0A162N370	A0A162NH30	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162N370	A0A162PZK1	A0A162N370	A0A162PZK1	Uncharacterized protein.	RNB domain-containing protein.	0.921
A0A162N370	A0A162Q3C7	A0A162N370	A0A162Q3C7	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.572
A0A162N370	A0A162TQR7	A0A162N370	A0A162TQR7	Uncharacterized protein.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.585
A0A162N370	A0A162UAK5	A0A162N370	A0A162UAK5	Uncharacterized protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.962
A0A162N370	A0A162V2U8	A0A162N370	A0A162V2U8	Uncharacterized protein.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.921
A0A162N370	A0A163A803	A0A162N370	A0A163A803	Uncharacterized protein.	S1 motif domain-containing protein.	0.999
A0A162N370	A0A163BFW3	A0A162N370	A0A163BFW3	Uncharacterized protein.	RNB domain-containing protein.	0.921
A0A162N370	A0A163D3B3	A0A162N370	A0A163D3B3	Uncharacterized protein.	Uncharacterized protein.	0.468
A0A162N370	A0A167LNU3	A0A162N370	A0A167LNU3	Uncharacterized protein.	RNB domain-containing protein.	0.921
A0A162N370	A0A167N541	A0A162N370	A0A167N541	Uncharacterized protein.	RNB domain-containing protein.	0.921
A0A162N370	A0A167QTH7	A0A162N370	A0A167QTH7	Uncharacterized protein.	Uncharacterized protein.	0.923
A0A162N370	A0A167QVL4	A0A162N370	A0A167QVL4	Uncharacterized protein.	Uncharacterized protein.	0.506
A0A162N370	A0A167QYT3	A0A162N370	A0A167QYT3	Uncharacterized protein.	RNB domain-containing protein; Belongs to the RNR ribonuclease family.	0.959
A0A162N370	A0A167R3S1	A0A162N370	A0A167R3S1	Uncharacterized protein.	Uncharacterized protein.	0.506
A0A162N3R5	A0A162N370	A0A162N3R5	A0A162N370	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.461
A0A162N3R5	A0A162N887	A0A162N3R5	A0A162N887	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	RNB domain-containing protein.	0.425
A0A162N3R5	A0A162NH30	A0A162N3R5	A0A162NH30	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.461