(11 nodes) PIN-like domain superfamily network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A167QMF1	XPGN domain-containing protein. (430 aa)
	A0A162U2V6	PINc domain-containing protein. (195 aa)
	A0A162UAK5	Uncharacterized protein; Belongs to the RNR ribonuclease family. (970 aa)
	A0A162V3B0	Uncharacterized protein. (311 aa)
	A0A162WQ14	PINc domain-containing protein. (356 aa)
	A0A162Y885	Uncharacterized protein. (730 aa)
	A0A167NIV2	Uncharacterized protein. (1091 aa)
	FEN1	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (375 aa)
	A0A167R319	PINc domain-containing protein. (1132 aa)
	A0A162Q4N2	XPGI domain-containing protein. (152 aa)
	A0A162NFF3	Uncharacterized protein. (223 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162NFF3	A0A162U2V6	A0A162NFF3	A0A162U2V6	Uncharacterized protein.	PINc domain-containing protein.	0.907
A0A162Q4N2	A0A162V3B0	A0A162Q4N2	A0A162V3B0	XPGI domain-containing protein.	Uncharacterized protein.	0.798
A0A162Q4N2	A0A162Y885	A0A162Q4N2	A0A162Y885	XPGI domain-containing protein.	Uncharacterized protein.	0.530
A0A162Q4N2	A0A167NIV2	A0A162Q4N2	A0A167NIV2	XPGI domain-containing protein.	Uncharacterized protein.	0.503
A0A162U2V6	A0A162NFF3	A0A162U2V6	A0A162NFF3	PINc domain-containing protein.	Uncharacterized protein.	0.907
A0A162U2V6	A0A162UAK5	A0A162U2V6	A0A162UAK5	PINc domain-containing protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.427
A0A162UAK5	A0A162U2V6	A0A162UAK5	A0A162U2V6	Uncharacterized protein; Belongs to the RNR ribonuclease family.	PINc domain-containing protein.	0.427
A0A162V3B0	A0A162Q4N2	A0A162V3B0	A0A162Q4N2	Uncharacterized protein.	XPGI domain-containing protein.	0.798
A0A162V3B0	A0A162Y885	A0A162V3B0	A0A162Y885	Uncharacterized protein.	Uncharacterized protein.	0.570
A0A162V3B0	A0A167NIV2	A0A162V3B0	A0A167NIV2	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A162V3B0	A0A167QMF1	A0A162V3B0	A0A167QMF1	Uncharacterized protein.	XPGN domain-containing protein.	0.798
A0A162V3B0	A0A167R319	A0A162V3B0	A0A167R319	Uncharacterized protein.	PINc domain-containing protein.	0.418
A0A162V3B0	FEN1	A0A162V3B0	A0A167P3U0	Uncharacterized protein.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.914
A0A162Y885	A0A162Q4N2	A0A162Y885	A0A162Q4N2	Uncharacterized protein.	XPGI domain-containing protein.	0.530
A0A162Y885	A0A162V3B0	A0A162Y885	A0A162V3B0	Uncharacterized protein.	Uncharacterized protein.	0.570
A0A162Y885	A0A167NIV2	A0A162Y885	A0A167NIV2	Uncharacterized protein.	Uncharacterized protein.	0.513
A0A162Y885	A0A167QMF1	A0A162Y885	A0A167QMF1	Uncharacterized protein.	XPGN domain-containing protein.	0.530
A0A162Y885	FEN1	A0A162Y885	A0A167P3U0	Uncharacterized protein.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.530
A0A167NIV2	A0A162Q4N2	A0A167NIV2	A0A162Q4N2	Uncharacterized protein.	XPGI domain-containing protein.	0.503
A0A167NIV2	A0A162V3B0	A0A167NIV2	A0A162V3B0	Uncharacterized protein.	Uncharacterized protein.	0.499