(27 nodes) DNA/RNA polymerase superfamily network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A163ERQ5	RT_RNaseH_2 domain-containing protein. (79 aa)
	A0A163D3M7	Uncharacterized protein. (840 aa)
	A0A163D1U8	DNA polymerase. (1072 aa)
	A0A163CRF2	Uncharacterized protein. (81 aa)
	A0A163AD41	Uncharacterized protein. (266 aa)
	A0A162YLI7	Uncharacterized protein. (287 aa)
	A0A162V1X6	Uncharacterized protein. (386 aa)
	A0A162UWR5	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (999 aa)
	A0A162UGC7	DNA polymerase. (828 aa)
	A0A162U707	Uncharacterized protein. (60 aa)
	A0A162U3K3	UmuC domain-containing protein. (406 aa)
	A0A162TG61	Uncharacterized protein. (66 aa)
	A0A162T9K4	Uncharacterized protein. (81 aa)
	A0A162T8J4	Uncharacterized protein. (55 aa)
	A0A162Q0J9	POLAc domain-containing protein. (1015 aa)
	A0A162PFN5	Uncharacterized protein. (68 aa)
	A0A167RAK6	Uncharacterized protein. (674 aa)
	A0A167QV18	Uncharacterized protein. (418 aa)
	A0A167NM89	DNA polymerase. (1151 aa)
	A0A167MXD6	Uncharacterized protein. (970 aa)
	A0A167MNC4	UmuC domain-containing protein. (609 aa)
	A0A167ML36	Uncharacterized protein. (748 aa)
	A0A167MI72	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2213 aa)
	A0A167M601	Uncharacterized protein. (122 aa)
	A0A167L4L7	UmuC domain-containing protein. (258 aa)
	A0A167JPC0	Uncharacterized protein. (105 aa)
	A0A163DMV4	Uncharacterized protein. (739 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162Q0J9	A0A162U3K3	POLAc domain-containing protein.	UmuC domain-containing protein.	0.485
A0A162Q0J9	A0A162UGC7	POLAc domain-containing protein.	DNA polymerase.	0.632
A0A162Q0J9	A0A162UWR5	POLAc domain-containing protein.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.495
A0A162Q0J9	A0A163D1U8	POLAc domain-containing protein.	DNA polymerase.	0.439
A0A162Q0J9	A0A167L4L7	POLAc domain-containing protein.	UmuC domain-containing protein.	0.485
A0A162Q0J9	A0A167MI72	POLAc domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.625
A0A162Q0J9	A0A167MNC4	POLAc domain-containing protein.	UmuC domain-containing protein.	0.612
A0A162Q0J9	A0A167NM89	POLAc domain-containing protein.	DNA polymerase.	0.439
A0A162T9K4	A0A162U707	Uncharacterized protein.	Uncharacterized protein.	0.492
A0A162U3K3	A0A162Q0J9	UmuC domain-containing protein.	POLAc domain-containing protein.	0.485
A0A162U3K3	A0A162UGC7	UmuC domain-containing protein.	DNA polymerase.	0.937
A0A162U3K3	A0A163D1U8	UmuC domain-containing protein.	DNA polymerase.	0.899
A0A162U3K3	A0A167L4L7	UmuC domain-containing protein.	UmuC domain-containing protein.	0.989
A0A162U3K3	A0A167MI72	UmuC domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.903
A0A162U3K3	A0A167MNC4	UmuC domain-containing protein.	UmuC domain-containing protein.	0.921
A0A162U3K3	A0A167NM89	UmuC domain-containing protein.	DNA polymerase.	0.883
A0A162U707	A0A162T9K4	Uncharacterized protein.	Uncharacterized protein.	0.492
A0A162U707	A0A163AD41	Uncharacterized protein.	Uncharacterized protein.	0.427
A0A162U707	A0A163CRF2	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A162UGC7	A0A162Q0J9	DNA polymerase.	POLAc domain-containing protein.	0.632