(8 nodes) Resolution of D-loop Structures through Holliday Junction Intermediates network (Phycomyces blakesleeanus)

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Your Input:
	A0A162NC51	Uncharacterized protein. (1062 aa)
	A0A162WYP1	AA_TRNA_LIGASE_II domain-containing protein. (566 aa)
	A0A163B0P3	ERCC4 domain-containing protein. (531 aa)
	A0A167KUJ8	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (518 aa)
	A0A167NFT6	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (683 aa)
	A0A167P417	Rad51 domain-containing protein. (100 aa)
	SLX1	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (277 aa)
	A0A167PY74	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (632 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162NC51	A0A162WYP1	A0A162NC51	A0A162WYP1	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.796
A0A162NC51	A0A163B0P3	A0A162NC51	A0A163B0P3	Uncharacterized protein.	ERCC4 domain-containing protein.	0.798
A0A162NC51	A0A167KUJ8	A0A162NC51	A0A167KUJ8	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.794
A0A162NC51	A0A167NFT6	A0A162NC51	A0A167NFT6	Uncharacterized protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.802
A0A162NC51	A0A167P417	A0A162NC51	A0A167P417	Uncharacterized protein.	Rad51 domain-containing protein.	0.965
A0A162NC51	A0A167PY74	A0A162NC51	A0A167PY74	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.794
A0A162NC51	SLX1	A0A162NC51	A0A167PH33	Uncharacterized protein.	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.	0.699
A0A162WYP1	A0A162NC51	A0A162WYP1	A0A162NC51	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein.	0.796
A0A162WYP1	A0A163B0P3	A0A162WYP1	A0A163B0P3	AA_TRNA_LIGASE_II domain-containing protein.	ERCC4 domain-containing protein.	0.981
A0A162WYP1	A0A167KUJ8	A0A162WYP1	A0A167KUJ8	AA_TRNA_LIGASE_II domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.763
A0A162WYP1	A0A167NFT6	A0A162WYP1	A0A167NFT6	AA_TRNA_LIGASE_II domain-containing protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.778
A0A162WYP1	A0A167P417	A0A162WYP1	A0A167P417	AA_TRNA_LIGASE_II domain-containing protein.	Rad51 domain-containing protein.	0.707
A0A162WYP1	A0A167PY74	A0A162WYP1	A0A167PY74	AA_TRNA_LIGASE_II domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.763
A0A162WYP1	SLX1	A0A162WYP1	A0A167PH33	AA_TRNA_LIGASE_II domain-containing protein.	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.	0.983
A0A163B0P3	A0A162NC51	A0A163B0P3	A0A162NC51	ERCC4 domain-containing protein.	Uncharacterized protein.	0.798
A0A163B0P3	A0A162WYP1	A0A163B0P3	A0A162WYP1	ERCC4 domain-containing protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.981
A0A163B0P3	A0A167KUJ8	A0A163B0P3	A0A167KUJ8	ERCC4 domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.973
A0A163B0P3	A0A167NFT6	A0A163B0P3	A0A167NFT6	ERCC4 domain-containing protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.938
A0A163B0P3	A0A167P417	A0A163B0P3	A0A167P417	ERCC4 domain-containing protein.	Rad51 domain-containing protein.	0.883
A0A163B0P3	A0A167PY74	A0A163B0P3	A0A167PY74	ERCC4 domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.973