(12 nodes) Pexophagy network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A167KNM6	Ubiquitin carboxyl-terminal hydrolase. (581 aa)
	A0A167R2X0	Ubiquitin-like domain-containing protein. (155 aa)
	A0A167P3G5	Ubiquitin carboxyl-terminal hydrolase. (807 aa)
	A0A167NGQ6	TPR_REGION domain-containing protein. (591 aa)
	A0A167KWM3	Uncharacterized protein. (222 aa)
	A0A167RD89	Ubiquitin-like domain-containing protein. (155 aa)
	A0A167LAU3	TPR_REGION domain-containing protein. (177 aa)
	A0A167MSU4	TPR_REGION domain-containing protein. (686 aa)
	A0A167R6J7	Uncharacterized protein. (533 aa)
	A0A162N642	KxDL domain-containing protein. (111 aa)
	A0A162X7B1	Ubiquitin carboxyl-terminal hydrolase. (645 aa)
	A0A167KJS4	Ubiquitin-like domain-containing protein. (153 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162N642	A0A167KJS4	KxDL domain-containing protein.	Ubiquitin-like domain-containing protein.	0.707
A0A162N642	A0A167KWM3	KxDL domain-containing protein.	Uncharacterized protein.	0.692
A0A162N642	A0A167R2X0	KxDL domain-containing protein.	Ubiquitin-like domain-containing protein.	0.707
A0A162N642	A0A167R6J7	KxDL domain-containing protein.	Uncharacterized protein.	0.692
A0A162N642	A0A167RD89	KxDL domain-containing protein.	Ubiquitin-like domain-containing protein.	0.707
A0A162X7B1	A0A167KJS4	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like domain-containing protein.	0.882
A0A162X7B1	A0A167KWM3	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.881
A0A162X7B1	A0A167LAU3	Ubiquitin carboxyl-terminal hydrolase.	TPR_REGION domain-containing protein.	0.646
A0A162X7B1	A0A167MSU4	Ubiquitin carboxyl-terminal hydrolase.	TPR_REGION domain-containing protein.	0.646
A0A162X7B1	A0A167NGQ6	Ubiquitin carboxyl-terminal hydrolase.	TPR_REGION domain-containing protein.	0.646
A0A162X7B1	A0A167R2X0	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like domain-containing protein.	0.882
A0A162X7B1	A0A167R6J7	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.881
A0A162X7B1	A0A167RD89	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like domain-containing protein.	0.882
A0A167KJS4	A0A162N642	Ubiquitin-like domain-containing protein.	KxDL domain-containing protein.	0.707
A0A167KJS4	A0A162X7B1	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.882
A0A167KJS4	A0A167KNM6	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.882
A0A167KJS4	A0A167KWM3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.930
A0A167KJS4	A0A167LAU3	Ubiquitin-like domain-containing protein.	TPR_REGION domain-containing protein.	0.694
A0A167KJS4	A0A167MSU4	Ubiquitin-like domain-containing protein.	TPR_REGION domain-containing protein.	0.694
A0A167KJS4	A0A167NGQ6	Ubiquitin-like domain-containing protein.	TPR_REGION domain-containing protein.	0.694