(78 nodes) Mismatch repair network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162WDF7	Uncharacterized protein. (270 aa)
	A0A163DIT7	Retrotrans_gag domain-containing protein. (293 aa)
	A0A163D2Z2	Uncharacterized protein. (273 aa)
	A0A163D1U8	DNA polymerase. (1072 aa)
	A0A163D119	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (929 aa)
	A0A163CSL9	CCHC-type zinc finger transcription factor. (498 aa)
	A0A163B3L4	Uncharacterized protein. (495 aa)
	A0A163APY4	Uncharacterized protein. (902 aa)
	A0A163AD41	Uncharacterized protein. (266 aa)
	A0A163ABA4	Uncharacterized protein. (194 aa)
	A0A162ZWE1	AAA domain-containing protein. (337 aa)
	A0A162ZRQ3	Uncharacterized protein. (142 aa)
	A0A162ZRD6	Uncharacterized protein. (179 aa)
	A0A162ZIE5	Uncharacterized protein. (266 aa)
	A0A162ZI85	DDE_Tnp_IS1595 domain-containing protein. (151 aa)
	A0A162Z921	DDE_Tnp_IS1595 domain-containing protein. (319 aa)
	A0A162Y9L4	Uncharacterized protein. (111 aa)
	A0A162XIN6	Uncharacterized protein. (264 aa)
	A0A162XGQ2	Vezatin domain-containing protein. (595 aa)
	A0A162XBY4	Uncharacterized protein. (757 aa)
	A0A162WLG4	CCHC-type zinc finger transcription factor. (437 aa)
	A0A162WKP2	GAR domain-containing protein. (884 aa)
	A0A162W790	Uncharacterized protein. (93 aa)
	A0A162W711	DDE_Tnp_IS1595 domain-containing protein. (322 aa)
	A0A162V3B0	Uncharacterized protein. (311 aa)
	A0A162UE24	Uncharacterized protein. (329 aa)
	A0A162U9H3	Uncharacterized protein. (422 aa)
	A0A162U944	DNA ligase. (639 aa)
	A0A162U6T4	Uncharacterized protein. (853 aa)
	A0A162U6J5	AAA domain-containing protein. (749 aa)
	A0A162TTU4	Uncharacterized protein. (314 aa)
	A0A162TCK3	Uncharacterized protein. (104 aa)
	A0A162T9K4	Uncharacterized protein. (81 aa)
	A0A162Q3Y5	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (183 aa)
	A0A162PVS3	Uncharacterized protein. (121 aa)
	A0A162PQJ9	Retrotrans_gag domain-containing protein. (169 aa)
	A0A162PNP4	Integrase catalytic domain-containing protein. (51 aa)
	A0A162NJ17	Zds_C domain-containing protein. (592 aa)
	A0A162NII1	TPR_REGION domain-containing protein. (418 aa)
	A0A162NDE4	Uncharacterized protein. (249 aa)
	A0A162NBM8	DNA_MISMATCH_REPAIR_2 domain-containing protein. (943 aa)
	A0A162N8Y0	DNA_mis_repair domain-containing protein. (363 aa)
	A0A162N615	AAA domain-containing protein. (335 aa)
	A0A167QYE2	DNA_mis_repair domain-containing protein. (677 aa)
	A0A167QV27	DDE_Tnp_IS1595 domain-containing protein. (189 aa)
	A0A167Q470	DDE_Tnp_IS1595 domain-containing protein. (145 aa)
	A0A167Q3Z7	Uncharacterized protein. (202 aa)
	A0A167PSM1	Exonuclease domain-containing protein. (169 aa)
	A0A167PIB9	DNA_MISMATCH_REPAIR_2 domain-containing protein. (765 aa)
	A0A167PC19	Vezatin domain-containing protein. (595 aa)
	A0A167P8R7	Uncharacterized protein. (809 aa)
	A0A167NUH1	Uncharacterized protein. (292 aa)
	A0A167NI84	Uncharacterized protein. (269 aa)
	A0A167NCY6	Uncharacterized protein. (201 aa)
	A0A167N2Q8	Uncharacterized protein. (411 aa)
	A0A167MMI3	AAA domain-containing protein. (571 aa)
	A0A167M9L1	MutL_C domain-containing protein. (218 aa)
	A0A167M6Z9	Uncharacterized protein. (103 aa)
	A0A167M6F6	Uncharacterized protein. (177 aa)
	A0A167LTK7	Uncharacterized protein. (189 aa)
	A0A167LKE9	Uncharacterized protein. (337 aa)
	A0A167L178	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (601 aa)
	A0A167L0S4	GAR domain-containing protein. (142 aa)
	A0A167KVU4	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (883 aa)
	A0A167KVA2	DNA_mis_repair domain-containing protein. (687 aa)
	A0A167KUM1	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
	A0A167KHZ5	Uncharacterized protein. (430 aa)
	A0A167KG19	AAA domain-containing protein. (357 aa)
	A0A167K307	MutL_C domain-containing protein. (759 aa)
	A0A167JZ09	Uncharacterized protein. (257 aa)
	A0A167JPC0	Uncharacterized protein. (105 aa)
	A0A167JD07	Uncharacterized protein. (349 aa)
	A0A163ERC6	Uncharacterized protein. (302 aa)
	A0A163ELU5	Uncharacterized protein. (596 aa)
	A0A163E984	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (931 aa)
	A0A163E870	Uncharacterized protein. (516 aa)
	A0A163DVH2	BRCT domain-containing protein. (702 aa)
	A0A163DS74	Uncharacterized protein. (336 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162N615	A0A162NBM8	AAA domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.427
A0A162N615	A0A162NDE4	AAA domain-containing protein.	Uncharacterized protein.	0.955
A0A162N615	A0A162TTU4	AAA domain-containing protein.	Uncharacterized protein.	0.880
A0A162N615	A0A162U6J5	AAA domain-containing protein.	AAA domain-containing protein.	0.973
A0A162N615	A0A162U944	AAA domain-containing protein.	DNA ligase.	0.867
A0A162N615	A0A162U9H3	AAA domain-containing protein.	Uncharacterized protein.	0.709
A0A162N615	A0A162V3B0	AAA domain-containing protein.	Uncharacterized protein.	0.859
A0A162N615	A0A162XBY4	AAA domain-containing protein.	Uncharacterized protein.	0.973
A0A162N615	A0A162XGQ2	AAA domain-containing protein.	Vezatin domain-containing protein.	0.979
A0A162N615	A0A162ZWE1	AAA domain-containing protein.	AAA domain-containing protein.	0.999
A0A162N615	A0A163D119	AAA domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.464
A0A162N615	A0A163D1U8	AAA domain-containing protein.	DNA polymerase.	0.884
A0A162N615	A0A163DVH2	AAA domain-containing protein.	BRCT domain-containing protein.	0.982
A0A162N615	A0A163E984	AAA domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.539
A0A162N615	A0A167JD07	AAA domain-containing protein.	Uncharacterized protein.	0.999
A0A162N615	A0A167KG19	AAA domain-containing protein.	AAA domain-containing protein.	0.999
A0A162N615	A0A167KHZ5	AAA domain-containing protein.	Uncharacterized protein.	0.838
A0A162N615	A0A167KUM1	AAA domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.984
A0A162N615	A0A167KVA2	AAA domain-containing protein.	DNA_mis_repair domain-containing protein.	0.484
A0A162N615	A0A167L178	AAA domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.894