STRINGSTRING
Mo00069 Mo00069 Mo00158 Mo00158 Mo00259 Mo00259 Mo00347 Mo00347 Mo00380 Mo00380 Mo00509 Mo00509 Mo00791 Mo00791 Mo00873 Mo00873 Mo00923 Mo00923 Mo00977 Mo00977 Mo01105 Mo01105 Mo01152 Mo01152 Mo01170 Mo01170 Mo01197 Mo01197 Mo01254 Mo01254 Mo01474 Mo01474 Mo01441 Mo01441 Mo01741 Mo01741 Mo01895 Mo01895 Mo01963 Mo01963 Mo01972 Mo01972 Mo02019 Mo02019 Mo02105 Mo02105 Mo02165 Mo02165 Mo02196 Mo02196 Mo02287 Mo02287 Mo02681 Mo02681 Mo02706 Mo02706 Mo02893 Mo02893 Mo02945 Mo02945 Mo03004 Mo03004 Mo03367 Mo03367 Mo03443 Mo03443 Mo03536 Mo03536 Mo03659 Mo03659 Mo03709 Mo03709 Mo03714 Mo03714 Mo03830 Mo03830 Mo03847 Mo03847 Mo04030 Mo04030 Mo04237 Mo04237 Mo04382 Mo04382 Mo04562 Mo04562 Mo04632 Mo04632 Mo04712 Mo04712 Mo04834 Mo04834 Mo04951 Mo04951 Mo05021 Mo05021 Mo05122 Mo05122 Mo05723 Mo05723 Mo06213 Mo06213 Mo06350 Mo06350 Mo05892 Mo05892 Mo06014 Mo06014 Mo06159 Mo06159 Mo06489 Mo06489 Mo06504 Mo06504 Mo06538 Mo06538 Mo06560 Mo06560 Mo06701 Mo06701 Mo06705 Mo06705 Mo06723 Mo06723
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mo00069Uncharacterized protein. (1133 aa)
Mo00158Uncharacterized protein. (2410 aa)
Mo00259Uncharacterized protein. (147 aa)
Mo00347TFIIB-type domain-containing protein. (362 aa)
Mo00380TFIIE beta domain-containing protein. (246 aa)
Mo00509Uncharacterized protein. (331 aa)
Mo00791TAFII55_N domain-containing protein. (461 aa)
Mo00873Uncharacterized protein. (210 aa)
Mo00923Git3 domain-containing protein. (457 aa)
Mo00977Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (159 aa)
Mo01105Uncharacterized protein. (136 aa)
Mo01152Uncharacterized protein. (563 aa)
Mo01170General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (458 aa)
Mo01197BHLH domain-containing protein. (964 aa)
Mo01254Uncharacterized protein. (217 aa)
Mo01474Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (163 aa)
Mo01441DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
Mo01741TFIID_20kDa domain-containing protein. (543 aa)
Mo01895DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (143 aa)
Mo01963TAFII28 domain-containing protein. (138 aa)
Mo01972Uncharacterized protein. (330 aa)
Mo02019RING-type domain-containing protein. (370 aa)
Mo02105TFIIS N-terminal domain-containing protein. (441 aa)
Mo02165Uncharacterized protein. (966 aa)
Mo02196PHD-type domain-containing protein. (1211 aa)
Mo02287SEC7 domain-containing protein. (2579 aa)
Mo02681HTH TFE/IIEalpha-type domain-containing protein. (425 aa)
Mo02706Uncharacterized protein. (157 aa)
Mo02893RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (760 aa)
Mo02945FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (596 aa)
Mo03004DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2471 aa)
Mo03367RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
Mo03443Helicase ATP-binding domain-containing protein. (797 aa)
Mo03536Uncharacterized protein. (1605 aa)
Mo03659BSD domain-containing protein. (572 aa)
Mo03709HMG box domain-containing protein. (753 aa)
Mo03714CYCLIN domain-containing protein; Belongs to the cyclin family. (346 aa)
Mo03830BTP domain-containing protein. (497 aa)
Mo03847Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (773 aa)
Mo04030Uncharacterized protein. (738 aa)
Mo04237Uncharacterized protein. (399 aa)
Mo04382TAF4 domain-containing protein. (410 aa)
Mo04562Zds_C domain-containing protein. (1608 aa)
Mo04632TAF domain-containing protein. (511 aa)
Mo04712Uncharacterized protein. (180 aa)
Mo04834Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (110 aa)
Mo04951RPOLD domain-containing protein. (368 aa)
Mo05021Uncharacterized protein. (1296 aa)
Mo05122Plus3 domain-containing protein. (557 aa)
Mo05723Uncharacterized protein. (585 aa)
Mo06213RNA_pol_L_2 domain-containing protein. (148 aa)
Mo06350Helicase ATP-binding domain-containing protein. (830 aa)
Mo05892Uncharacterized protein. (496 aa)
Mo06014CDC73_C domain-containing protein. (418 aa)
Mo06159Uncharacterized protein. (207 aa)
Mo06489Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (367 aa)
Mo06504Uncharacterized protein. (298 aa)
Mo06538Uncharacterized protein. (111 aa)
Mo06560DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1327 aa)
Mo06701RTR1-type domain-containing protein. (323 aa)
Mo06705Uncharacterized protein. (192 aa)
Mo06723Uncharacterized protein. (1362 aa)
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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