17 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo00347	TFIIB-type domain-containing protein. (362 aa)
	Mo00380	TFIIE beta domain-containing protein. (246 aa)
	Mo00509	Uncharacterized protein. (331 aa)
	Mo01170	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (458 aa)
	Mo01254	Uncharacterized protein. (217 aa)
	Mo02019	RING-type domain-containing protein. (370 aa)
	Mo02165	Uncharacterized protein. (966 aa)
	Mo02681	HTH TFE/IIEalpha-type domain-containing protein. (425 aa)
	Mo02706	Uncharacterized protein. (157 aa)
	Mo03367	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
	Mo03443	Helicase ATP-binding domain-containing protein. (797 aa)
	Mo03659	BSD domain-containing protein. (572 aa)
	Mo03714	CYCLIN domain-containing protein; Belongs to the cyclin family. (346 aa)
	Mo03847	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (773 aa)
	Mo04237	Uncharacterized protein. (399 aa)
	Mo05723	Uncharacterized protein. (585 aa)
	Mo06489	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (367 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00347	Mo00380	G7DSZ2	G7DT87	TFIIB-type domain-containing protein.	TFIIE beta domain-containing protein.	0.984
Mo00347	Mo00509	G7DSZ2	G7DTL6	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.977
Mo00347	Mo01170	G7DSZ2	G7DVA8	TFIIB-type domain-containing protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.980
Mo00347	Mo01254	G7DSZ2	G7DVJ2	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.985
Mo00347	Mo02019	G7DSZ2	G7DXQ2	TFIIB-type domain-containing protein.	RING-type domain-containing protein.	0.976
Mo00347	Mo02165	G7DSZ2	G7DY50	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.986
Mo00347	Mo02681	G7DSZ2	G7DZL1	TFIIB-type domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.989
Mo00347	Mo02706	G7DSZ2	G7DZN5	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.829
Mo00347	Mo03367	G7DSZ2	G7E1I6	TFIIB-type domain-containing protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.982
Mo00347	Mo03443	G7DSZ2	G7E1R2	TFIIB-type domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.979
Mo00347	Mo03659	G7DSZ2	G7E2C5	TFIIB-type domain-containing protein.	BSD domain-containing protein.	0.974
Mo00347	Mo03714	G7DSZ2	G7E2H9	TFIIB-type domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.945
Mo00347	Mo03847	G7DSZ2	G7E2Z0	TFIIB-type domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.992
Mo00347	Mo04237	G7DSZ2	G7E3Z9	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.996
Mo00347	Mo05723	G7DSZ2	G7E874	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.984
Mo00347	Mo06489	G7DSZ2	G7EAC6	TFIIB-type domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.952
Mo00380	Mo00347	G7DT87	G7DSZ2	TFIIE beta domain-containing protein.	TFIIB-type domain-containing protein.	0.984
Mo00380	Mo00509	G7DT87	G7DTL6	TFIIE beta domain-containing protein.	Uncharacterized protein.	0.994
Mo00380	Mo01170	G7DT87	G7DVA8	TFIIE beta domain-containing protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.995
Mo00380	Mo01254	G7DT87	G7DVJ2	TFIIE beta domain-containing protein.	Uncharacterized protein.	0.977