5 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo00791	TAFII55_N domain-containing protein. (461 aa)
	Mo01741	TFIID_20kDa domain-containing protein. (543 aa)
	Mo04030	Uncharacterized protein. (738 aa)
	Mo04382	TAF4 domain-containing protein. (410 aa)
	Mo04712	Uncharacterized protein. (180 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00791	Mo01741	G7DU83	G7DWY9	TAFII55_N domain-containing protein.	TFIID_20kDa domain-containing protein.	0.998
Mo00791	Mo04030	G7DU83	G7E3E2	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.998
Mo00791	Mo04382	G7DU83	G7E4E4	TAFII55_N domain-containing protein.	TAF4 domain-containing protein.	0.998
Mo00791	Mo04712	G7DU83	G7E5C2	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.998
Mo01741	Mo00791	G7DWY9	G7DU83	TFIID_20kDa domain-containing protein.	TAFII55_N domain-containing protein.	0.998
Mo01741	Mo04030	G7DWY9	G7E3E2	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.998
Mo01741	Mo04382	G7DWY9	G7E4E4	TFIID_20kDa domain-containing protein.	TAF4 domain-containing protein.	0.998
Mo01741	Mo04712	G7DWY9	G7E5C2	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.998
Mo04030	Mo00791	G7E3E2	G7DU83	Uncharacterized protein.	TAFII55_N domain-containing protein.	0.998
Mo04030	Mo01741	G7E3E2	G7DWY9	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.998
Mo04030	Mo04382	G7E3E2	G7E4E4	Uncharacterized protein.	TAF4 domain-containing protein.	0.998
Mo04030	Mo04712	G7E3E2	G7E5C2	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo04382	Mo00791	G7E4E4	G7DU83	TAF4 domain-containing protein.	TAFII55_N domain-containing protein.	0.998
Mo04382	Mo01741	G7E4E4	G7DWY9	TAF4 domain-containing protein.	TFIID_20kDa domain-containing protein.	0.998
Mo04382	Mo04030	G7E4E4	G7E3E2	TAF4 domain-containing protein.	Uncharacterized protein.	0.998
Mo04382	Mo04712	G7E4E4	G7E5C2	TAF4 domain-containing protein.	Uncharacterized protein.	0.998
Mo04712	Mo00791	G7E5C2	G7DU83	Uncharacterized protein.	TAFII55_N domain-containing protein.	0.998
Mo04712	Mo01741	G7E5C2	G7DWY9	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.998
Mo04712	Mo04030	G7E5C2	G7E3E2	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo04712	Mo04382	G7E5C2	G7E4E4	Uncharacterized protein.	TAF4 domain-containing protein.	0.998