STRINGSTRING
Mo00158 Mo00158 Mo00259 Mo00259 Mo01105 Mo01105 Mo01441 Mo01441 Mo01895 Mo01895 Mo01972 Mo01972 Mo02105 Mo02105 Mo02287 Mo02287 Mo02893 Mo02893 Mo02945 Mo02945 Mo03004 Mo03004 Mo04562 Mo04562 Mo04834 Mo04834 Mo04951 Mo04951 Mo05021 Mo05021 Mo05122 Mo05122 Mo06213 Mo06213 Mo05892 Mo05892 Mo06014 Mo06014 Mo06159 Mo06159 Mo06504 Mo06504 Mo06538 Mo06538 Mo06560 Mo06560 Mo06701 Mo06701 Mo06723 Mo06723
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mo00158Uncharacterized protein. (2410 aa)
Mo00259Uncharacterized protein. (147 aa)
Mo01105Uncharacterized protein. (136 aa)
Mo01441DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
Mo01895DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (143 aa)
Mo01972Uncharacterized protein. (330 aa)
Mo02105TFIIS N-terminal domain-containing protein. (441 aa)
Mo02287SEC7 domain-containing protein. (2579 aa)
Mo02893RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (760 aa)
Mo02945FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (596 aa)
Mo03004DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2471 aa)
Mo04562Zds_C domain-containing protein. (1608 aa)
Mo04834Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (110 aa)
Mo04951RPOLD domain-containing protein. (368 aa)
Mo05021Uncharacterized protein. (1296 aa)
Mo05122Plus3 domain-containing protein. (557 aa)
Mo06213RNA_pol_L_2 domain-containing protein. (148 aa)
Mo05892Uncharacterized protein. (496 aa)
Mo06014CDC73_C domain-containing protein. (418 aa)
Mo06159Uncharacterized protein. (207 aa)
Mo06504Uncharacterized protein. (298 aa)
Mo06538Uncharacterized protein. (111 aa)
Mo06560DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1327 aa)
Mo06701RTR1-type domain-containing protein. (323 aa)
Mo06723Uncharacterized protein. (1362 aa)
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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