(5 nodes) Organellar small ribosomal subunit network (Mixia osmundae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo00337	AAA domain-containing protein. (414 aa)
	Mo01452	Uncharacterized protein. (283 aa)
	Mo01811	Uncharacterized protein. (375 aa)
	Mo02130	Ribosomal_S10 domain-containing protein. (586 aa)
	Mo06656	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (347 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00337	Mo01452	G7DSY2	G7DWB0	AAA domain-containing protein.	Uncharacterized protein.	0.997
Mo00337	Mo01811	G7DSY2	G7DWP4	AAA domain-containing protein.	Uncharacterized protein.	0.998
Mo00337	Mo02130	G7DSY2	G7DY16	AAA domain-containing protein.	Ribosomal_S10 domain-containing protein.	0.998
Mo00337	Mo06656	G7DSY2	G7EAU3	AAA domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
Mo01452	Mo00337	G7DWB0	G7DSY2	Uncharacterized protein.	AAA domain-containing protein.	0.997
Mo01452	Mo01811	G7DWB0	G7DWP4	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo01452	Mo02130	G7DWB0	G7DY16	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.999
Mo01452	Mo06656	G7DWB0	G7EAU3	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
Mo01811	Mo00337	G7DWP4	G7DSY2	Uncharacterized protein.	AAA domain-containing protein.	0.998
Mo01811	Mo01452	G7DWP4	G7DWB0	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo01811	Mo02130	G7DWP4	G7DY16	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.999
Mo01811	Mo06656	G7DWP4	G7EAU3	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
Mo02130	Mo00337	G7DY16	G7DSY2	Ribosomal_S10 domain-containing protein.	AAA domain-containing protein.	0.998
Mo02130	Mo01452	G7DY16	G7DWB0	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
Mo02130	Mo01811	G7DY16	G7DWP4	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
Mo02130	Mo06656	G7DY16	G7EAU3	Ribosomal_S10 domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
Mo06656	Mo00337	G7EAU3	G7DSY2	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	AAA domain-containing protein.	0.999
Mo06656	Mo01452	G7EAU3	G7DWB0	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.999
Mo06656	Mo01811	G7EAU3	G7DWP4	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.999
Mo06656	Mo02130	G7EAU3	G7DY16	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal_S10 domain-containing protein.	0.999