14 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo01741	TFIID_20kDa domain-containing protein. (543 aa)
	Mo06068	Uncharacterized protein. (437 aa)
	Mo04668	Uncharacterized protein. (352 aa)
	Mo04632	TAF domain-containing protein. (511 aa)
	Mo04264	SCA7 domain-containing protein. (299 aa)
	Mo03622	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3724 aa)
	Mo02081	Uncharacterized protein. (1183 aa)
	Mo01651	Bromo domain-containing protein. (718 aa)
	Mo01636	WD_REPEATS_REGION domain-containing protein. (575 aa)
	Mo01474	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (163 aa)
	Mo00873	Uncharacterized protein. (210 aa)
	Mo00586	SGF29 C-terminal domain-containing protein. (342 aa)
	Mo00359	Uncharacterized protein. (386 aa)
	Mo00090	Uncharacterized protein. (618 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00090	Mo00359	G7DS89	G7DT03	Uncharacterized protein.	Uncharacterized protein.	0.994
Mo00090	Mo00586	G7DS89	G7DT61	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.995
Mo00090	Mo00873	G7DS89	G7DUG4	Uncharacterized protein.	Uncharacterized protein.	0.994
Mo00090	Mo01474	G7DS89	G7DW14	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.988
Mo00090	Mo01636	G7DS89	G7DWM1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.843
Mo00090	Mo01651	G7DS89	G7DWP9	Uncharacterized protein.	Bromo domain-containing protein.	0.995
Mo00090	Mo01741	G7DS89	G7DWY9	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.985
Mo00090	Mo02081	G7DS89	G7DXW7	Uncharacterized protein.	Uncharacterized protein.	0.996
Mo00090	Mo03622	G7DS89	G7E288	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.993
Mo00090	Mo04264	G7DS89	G7E426	Uncharacterized protein.	SCA7 domain-containing protein.	0.983
Mo00090	Mo04632	G7DS89	G7E542	Uncharacterized protein.	TAF domain-containing protein.	0.995
Mo00090	Mo04668	G7DS89	G7E578	Uncharacterized protein.	Uncharacterized protein.	0.975
Mo00359	Mo00090	G7DT03	G7DS89	Uncharacterized protein.	Uncharacterized protein.	0.994
Mo00359	Mo00586	G7DT03	G7DT61	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.994
Mo00359	Mo00873	G7DT03	G7DUG4	Uncharacterized protein.	Uncharacterized protein.	0.994
Mo00359	Mo01474	G7DT03	G7DW14	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.994
Mo00359	Mo01636	G7DT03	G7DWM1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.862
Mo00359	Mo01651	G7DT03	G7DWP9	Uncharacterized protein.	Bromo domain-containing protein.	0.994
Mo00359	Mo01741	G7DT03	G7DWY9	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.994
Mo00359	Mo02081	G7DT03	G7DXW7	Uncharacterized protein.	Uncharacterized protein.	0.985