12 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo06014	CDC73_C domain-containing protein. (418 aa)
	Mo04834	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (110 aa)
	Mo04562	Zds_C domain-containing protein. (1608 aa)
	Mo00977	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (159 aa)
	Mo03847	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (773 aa)
	Mo02105	TFIIS N-terminal domain-containing protein. (441 aa)
	Mo01972	Uncharacterized protein. (330 aa)
	Mo00069	Uncharacterized protein. (1133 aa)
	Mo05021	Uncharacterized protein. (1296 aa)
	Mo05122	Plus3 domain-containing protein. (557 aa)
	Mo05877	CID domain-containing protein. (788 aa)
	Mo05892	Uncharacterized protein. (496 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00069	Mo01972	G7DS68	G7DXK5	Uncharacterized protein.	Uncharacterized protein.	0.793
Mo00069	Mo03847	G7DS68	G7E2Z0	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.963
Mo00977	Mo01972	G7DUR7	G7DXK5	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	Uncharacterized protein.	0.434
Mo00977	Mo02105	G7DUR7	G7DXZ1	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	TFIIS N-terminal domain-containing protein.	0.887
Mo00977	Mo04562	G7DUR7	G7E4X2	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	Zds_C domain-containing protein.	0.532
Mo00977	Mo04834	G7DUR7	G7E5P1	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.886
Mo00977	Mo05021	G7DUR7	G7E676	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	Uncharacterized protein.	0.719
Mo00977	Mo05122	G7DUR7	G7E6H6	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	Plus3 domain-containing protein.	0.734
Mo00977	Mo05892	G7DUR7	G7E981	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	Uncharacterized protein.	0.857
Mo00977	Mo06014	G7DUR7	G7E9K0	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	CDC73_C domain-containing protein.	0.872
Mo01972	Mo00069	G7DXK5	G7DS68	Uncharacterized protein.	Uncharacterized protein.	0.793
Mo01972	Mo00977	G7DXK5	G7DUR7	Uncharacterized protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.434
Mo01972	Mo02105	G7DXK5	G7DXZ1	Uncharacterized protein.	TFIIS N-terminal domain-containing protein.	0.940
Mo01972	Mo03847	G7DXK5	G7E2Z0	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.925
Mo01972	Mo04562	G7DXK5	G7E4X2	Uncharacterized protein.	Zds_C domain-containing protein.	0.857
Mo01972	Mo04834	G7DXK5	G7E5P1	Uncharacterized protein.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.979
Mo01972	Mo05021	G7DXK5	G7E676	Uncharacterized protein.	Uncharacterized protein.	0.789
Mo01972	Mo05122	G7DXK5	G7E6H6	Uncharacterized protein.	Plus3 domain-containing protein.	0.844
Mo01972	Mo05877	G7DXK5	G7E966	Uncharacterized protein.	CID domain-containing protein.	0.674
Mo01972	Mo05892	G7DXK5	G7E981	Uncharacterized protein.	Uncharacterized protein.	0.877