12 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo06538	Uncharacterized protein. (111 aa)
	Mo06504	Uncharacterized protein. (298 aa)
	Mo01441	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	Mo01105	Uncharacterized protein. (136 aa)
	Mo03927	Uncharacterized protein. (466 aa)
	Mo05507	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (127 aa)
	Mo05533	RPOLD domain-containing protein. (368 aa)
	Mo00559	Uncharacterized protein. (410 aa)
	Mo06215	RNA_pol_L_2 domain-containing protein. (171 aa)
	Mo00259	Uncharacterized protein. (147 aa)
	Mo03123	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1236 aa)
	Mo03293	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1866 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00259	Mo00559	G7DSQ7	G7DT34	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00259	Mo01105	G7DSQ7	G7DV43	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00259	Mo01441	G7DSQ7	G7DW99	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
Mo00259	Mo03123	G7DSQ7	G7E0U6	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
Mo00259	Mo03293	G7DSQ7	G7E1B3	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
Mo00259	Mo03927	G7DSQ7	G7E369	Uncharacterized protein.	Uncharacterized protein.	0.995
Mo00259	Mo05507	G7DSQ7	G7E7K9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.998
Mo00259	Mo05533	G7DSQ7	G7E7N5	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
Mo00259	Mo06215	G7DSQ7	G7E8P6	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.998
Mo00259	Mo06504	G7DSQ7	G7EAE1	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo00259	Mo06538	G7DSQ7	G7EAH5	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo00559	Mo00259	G7DT34	G7DSQ7	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00559	Mo01105	G7DT34	G7DV43	Uncharacterized protein.	Uncharacterized protein.	0.996
Mo00559	Mo01441	G7DT34	G7DW99	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.996
Mo00559	Mo03123	G7DT34	G7E0U6	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
Mo00559	Mo03293	G7DT34	G7E1B3	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
Mo00559	Mo03927	G7DT34	G7E369	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo00559	Mo05507	G7DT34	G7E7K9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
Mo00559	Mo05533	G7DT34	G7E7N5	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
Mo00559	Mo06215	G7DT34	G7E8P6	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.998