33 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo06067	Uncharacterized protein. (917 aa)
	Mo04528	XPA_C domain-containing protein. (422 aa)
	Mo04676	ENDO3c domain-containing protein. (450 aa)
	Mo04719	Checkpoint protein; Belongs to the HUS1 family. (334 aa)
	Mo04966	Uncharacterized protein. (1129 aa)
	Mo05122	Plus3 domain-containing protein. (557 aa)
	Mo02189	AAA domain-containing protein; Belongs to the AAA ATPase family. (432 aa)
	Mo05595	Uncharacterized protein. (1214 aa)
	Mo05530	CULLIN_2 domain-containing protein; Belongs to the cullin family. (796 aa)
	Mo05423	RRM domain-containing protein. (243 aa)
	Mo05348	Uncharacterized protein. (738 aa)
	Mo05219	Uncharacterized protein. (1010 aa)
	Mo04168	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2251 aa)
	Mo06131	DNA_LIGASE_A3 domain-containing protein. (945 aa)
	Mo06387	Uncharacterized protein. (252 aa)
	Mo06386	Uncharacterized protein. (253 aa)
	Mo06640	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (605 aa)
	Mo02165	Uncharacterized protein. (966 aa)
	Mo02019	RING-type domain-containing protein. (370 aa)
	Mo01895	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (143 aa)
	Mo01385	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (784 aa)
	Mo01170	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (458 aa)
	Mo00509	Uncharacterized protein. (331 aa)
	Mo00483	ERCC4 domain-containing protein. (992 aa)
	Mo00408	Uncharacterized protein. (1263 aa)
	Mo00393	Uncharacterized protein. (1209 aa)
	Mo03659	BSD domain-containing protein. (572 aa)
	Mo03671	DNA polymerase. (769 aa)
	Mo03367	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
	Mo02706	Uncharacterized protein. (157 aa)
	Mo03443	Helicase ATP-binding domain-containing protein. (797 aa)
	Mo04086	AAA domain-containing protein; Belongs to the AAA ATPase family. (406 aa)
	Mo04129	Uncharacterized protein. (434 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00393	Mo00408	G7DTA0	G7DTB5	Uncharacterized protein.	Uncharacterized protein.	0.986
Mo00393	Mo00483	G7DTA0	G7DTJ0	Uncharacterized protein.	ERCC4 domain-containing protein.	0.908
Mo00393	Mo00509	G7DTA0	G7DTL6	Uncharacterized protein.	Uncharacterized protein.	0.755
Mo00393	Mo01170	G7DTA0	G7DVA8	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.925
Mo00393	Mo01385	G7DTA0	G7DVX1	Uncharacterized protein.	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	0.629
Mo00393	Mo01895	G7DTA0	G7DXC9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.510
Mo00393	Mo02165	G7DTA0	G7DY50	Uncharacterized protein.	Uncharacterized protein.	0.978
Mo00393	Mo03367	G7DTA0	G7E1I6	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.737
Mo00393	Mo03443	G7DTA0	G7E1R2	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.971
Mo00393	Mo03659	G7DTA0	G7E2C5	Uncharacterized protein.	BSD domain-containing protein.	0.987
Mo00393	Mo03671	G7DTA0	G7E2D7	Uncharacterized protein.	DNA polymerase.	0.755
Mo00393	Mo04129	G7DTA0	G7E3P0	Uncharacterized protein.	Uncharacterized protein.	0.786
Mo00393	Mo04168	G7DTA0	G7E3T0	Uncharacterized protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.737
Mo00393	Mo04528	G7DTA0	G7E4T8	Uncharacterized protein.	XPA_C domain-containing protein.	0.917
Mo00393	Mo04676	G7DTA0	G7E586	Uncharacterized protein.	ENDO3c domain-containing protein.	0.514
Mo00393	Mo04719	G7DTA0	G7E5C8	Uncharacterized protein.	Checkpoint protein; Belongs to the HUS1 family.	0.741
Mo00393	Mo04966	G7DTA0	G7E623	Uncharacterized protein.	Uncharacterized protein.	0.469
Mo00393	Mo05348	G7DTA0	G7E750	Uncharacterized protein.	Uncharacterized protein.	0.635
Mo00393	Mo05530	G7DTA0	G7E7N2	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.669
Mo00393	Mo06067	G7DTA0	G7E9Q2	Uncharacterized protein.	Uncharacterized protein.	0.819