21 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo00559	Uncharacterized protein. (410 aa)
	Mo06504	Uncharacterized protein. (298 aa)
	Mo06538	Uncharacterized protein. (111 aa)
	Mo06489	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (367 aa)
	Mo06215	RNA_pol_L_2 domain-containing protein. (171 aa)
	Mo05533	RPOLD domain-containing protein. (368 aa)
	Mo05507	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (127 aa)
	Mo00259	Uncharacterized protein. (147 aa)
	Mo05021	Uncharacterized protein. (1296 aa)
	Mo03927	Uncharacterized protein. (466 aa)
	Mo03659	BSD domain-containing protein. (572 aa)
	Mo03293	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1866 aa)
	Mo03276	Uncharacterized protein. (1763 aa)
	Mo03123	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1236 aa)
	Mo02877	SWIB domain-containing protein. (276 aa)
	Mo02583	Uncharacterized protein. (635 aa)
	Mo01972	Uncharacterized protein. (330 aa)
	Mo01441	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	Mo01174	Uncharacterized protein. (888 aa)
	Mo01105	Uncharacterized protein. (136 aa)
	Mo00411	Uncharacterized protein. (367 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00259	Mo00411	G7DSQ7	G7DTB8	Uncharacterized protein.	Uncharacterized protein.	0.980
Mo00259	Mo00559	G7DSQ7	G7DT34	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00259	Mo01105	G7DSQ7	G7DV43	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00259	Mo01174	G7DSQ7	G7DVB2	Uncharacterized protein.	Uncharacterized protein.	0.976
Mo00259	Mo01441	G7DSQ7	G7DW99	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
Mo00259	Mo01972	G7DSQ7	G7DXK5	Uncharacterized protein.	Uncharacterized protein.	0.985
Mo00259	Mo03123	G7DSQ7	G7E0U6	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
Mo00259	Mo03293	G7DSQ7	G7E1B3	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
Mo00259	Mo03659	G7DSQ7	G7E2C5	Uncharacterized protein.	BSD domain-containing protein.	0.973
Mo00259	Mo03927	G7DSQ7	G7E369	Uncharacterized protein.	Uncharacterized protein.	0.995
Mo00259	Mo05021	G7DSQ7	G7E676	Uncharacterized protein.	Uncharacterized protein.	0.945
Mo00259	Mo05507	G7DSQ7	G7E7K9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.998
Mo00259	Mo05533	G7DSQ7	G7E7N5	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
Mo00259	Mo06215	G7DSQ7	G7E8P6	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.998
Mo00259	Mo06489	G7DSQ7	G7EAC6	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.857
Mo00259	Mo06504	G7DSQ7	G7EAE1	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo00259	Mo06538	G7DSQ7	G7EAH5	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo00411	Mo00259	G7DTB8	G7DSQ7	Uncharacterized protein.	Uncharacterized protein.	0.980
Mo00411	Mo00559	G7DTB8	G7DT34	Uncharacterized protein.	Uncharacterized protein.	0.747
Mo00411	Mo01105	G7DTB8	G7DV43	Uncharacterized protein.	Uncharacterized protein.	0.974