21 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo01599	Protein kinase domain-containing protein. (832 aa)
	Mo06723	Uncharacterized protein. (1362 aa)
	Mo06649	Uncharacterized protein. (151 aa)
	Mo06489	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (367 aa)
	Mo06081	Uncharacterized protein. (402 aa)
	Mo06014	CDC73_C domain-containing protein. (418 aa)
	Mo05892	Uncharacterized protein. (496 aa)
	Mo05351	Uncharacterized protein. (286 aa)
	Mo05122	Plus3 domain-containing protein. (557 aa)
	Mo04931	CCHC-type domain-containing protein. (1271 aa)
	Mo04834	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (110 aa)
	Mo04202	Uncharacterized protein. (637 aa)
	Mo04086	AAA domain-containing protein; Belongs to the AAA ATPase family. (406 aa)
	Mo03847	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (773 aa)
	Mo03551	Protein kinase domain-containing protein. (2080 aa)
	Mo02287	SEC7 domain-containing protein. (2579 aa)
	Mo02260	Uncharacterized protein; Belongs to the cyclin family. (409 aa)
	Mo02189	AAA domain-containing protein; Belongs to the AAA ATPase family. (432 aa)
	Mo01576	CID domain-containing protein. (267 aa)
	Mo00334	Uncharacterized protein. (213 aa)
	Mo00158	Uncharacterized protein. (2410 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00158	Mo01599	G7DSF7	G7DWI4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.488
Mo00158	Mo02260	G7DSF7	G7DYE4	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.429
Mo00158	Mo02287	G7DSF7	G7DYH1	Uncharacterized protein.	SEC7 domain-containing protein.	0.985
Mo00158	Mo03551	G7DSF7	G7E1W5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.542
Mo00158	Mo04834	G7DSF7	G7E5P1	Uncharacterized protein.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.964
Mo00158	Mo05122	G7DSF7	G7E6H6	Uncharacterized protein.	Plus3 domain-containing protein.	0.945
Mo00158	Mo05892	G7DSF7	G7E981	Uncharacterized protein.	Uncharacterized protein.	0.942
Mo00158	Mo06014	G7DSF7	G7E9K0	Uncharacterized protein.	CDC73_C domain-containing protein.	0.947
Mo00158	Mo06723	G7DSF7	G7EB10	Uncharacterized protein.	Uncharacterized protein.	0.988
Mo00334	Mo02287	G7DSX9	G7DYH1	Uncharacterized protein.	SEC7 domain-containing protein.	0.607
Mo01576	Mo01599	G7DWG1	G7DWI4	CID domain-containing protein.	Protein kinase domain-containing protein.	0.967
Mo01576	Mo02260	G7DWG1	G7DYE4	CID domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.961
Mo01576	Mo03551	G7DWG1	G7E1W5	CID domain-containing protein.	Protein kinase domain-containing protein.	0.830
Mo01599	Mo00158	G7DWI4	G7DSF7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.488
Mo01599	Mo01576	G7DWI4	G7DWG1	Protein kinase domain-containing protein.	CID domain-containing protein.	0.967
Mo01599	Mo02260	G7DWI4	G7DYE4	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.986
Mo01599	Mo02287	G7DWI4	G7DYH1	Protein kinase domain-containing protein.	SEC7 domain-containing protein.	0.702
Mo01599	Mo03551	G7DWI4	G7E1W5	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.708
Mo01599	Mo04834	G7DWI4	G7E5P1	Protein kinase domain-containing protein.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.771
Mo01599	Mo05122	G7DWI4	G7E6H6	Protein kinase domain-containing protein.	Plus3 domain-containing protein.	0.452