21 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo05360	Uncharacterized protein. (683 aa)
	Mo06687	Uncharacterized protein. (814 aa)
	Mo06069	Uncharacterized protein. (1566 aa)
	Mo05750	Uncharacterized protein. (497 aa)
	Mo05599	Ubiquitin carboxyl-terminal hydrolase. (322 aa)
	Mo05568	Uncharacterized protein; Belongs to the heat shock protein 70 family. (689 aa)
	Mo04938	Uncharacterized protein; Belongs to the heat shock protein 70 family. (681 aa)
	Mo04348	J domain-containing protein. (1344 aa)
	Mo04334	Uncharacterized protein. (1080 aa)
	Mo03993	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (261 aa)
	Mo03143	Uncharacterized protein; Belongs to the BI1 family. (279 aa)
	Mo02632	Uncharacterized protein. (983 aa)
	Mo02510	Uncharacterized protein. (1090 aa)
	Mo02294	Uncharacterized protein; Belongs to the heat shock protein 70 family. (699 aa)
	Mo02140	Uncharacterized protein. (818 aa)
	Mo02101	Uncharacterized protein; Belongs to the AAA ATPase family. (877 aa)
	Mo01928	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (492 aa)
	Mo01414	OTU domain-containing protein. (358 aa)
	Mo00735	Uncharacterized protein. (515 aa)
	Mo00350	bVLRF1 domain-containing protein. (686 aa)
	Mo00264	RanBP2-type domain-containing protein. (703 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00264	Mo00350	G7DSR2	G7DSZ5	RanBP2-type domain-containing protein.	bVLRF1 domain-containing protein.	0.498
Mo00264	Mo00735	G7DSR2	G7DU28	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.998
Mo00264	Mo01414	G7DSR2	G7DW72	RanBP2-type domain-containing protein.	OTU domain-containing protein.	0.965
Mo00264	Mo02101	G7DSR2	G7DXY7	RanBP2-type domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.998
Mo00264	Mo03993	G7DSR2	G7E3A5	RanBP2-type domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.962
Mo00350	Mo00264	G7DSZ5	G7DSR2	bVLRF1 domain-containing protein.	RanBP2-type domain-containing protein.	0.498
Mo00350	Mo00735	G7DSZ5	G7DU28	bVLRF1 domain-containing protein.	Uncharacterized protein.	0.483
Mo00350	Mo02101	G7DSZ5	G7DXY7	bVLRF1 domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.910
Mo00735	Mo00264	G7DU28	G7DSR2	Uncharacterized protein.	RanBP2-type domain-containing protein.	0.998
Mo00735	Mo00350	G7DU28	G7DSZ5	Uncharacterized protein.	bVLRF1 domain-containing protein.	0.483
Mo00735	Mo01414	G7DU28	G7DW72	Uncharacterized protein.	OTU domain-containing protein.	0.972
Mo00735	Mo02101	G7DU28	G7DXY7	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.996
Mo00735	Mo03993	G7DU28	G7E3A5	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.966
Mo01414	Mo00264	G7DW72	G7DSR2	OTU domain-containing protein.	RanBP2-type domain-containing protein.	0.965
Mo01414	Mo00735	G7DW72	G7DU28	OTU domain-containing protein.	Uncharacterized protein.	0.972
Mo01414	Mo02101	G7DW72	G7DXY7	OTU domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.986
Mo02101	Mo00264	G7DXY7	G7DSR2	Uncharacterized protein; Belongs to the AAA ATPase family.	RanBP2-type domain-containing protein.	0.998
Mo02101	Mo00350	G7DXY7	G7DSZ5	Uncharacterized protein; Belongs to the AAA ATPase family.	bVLRF1 domain-containing protein.	0.910
Mo02101	Mo00735	G7DXY7	G7DU28	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.996
Mo02101	Mo01414	G7DXY7	G7DW72	Uncharacterized protein; Belongs to the AAA ATPase family.	OTU domain-containing protein.	0.986