5 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo06215	RNA_pol_L_2 domain-containing protein. (171 aa)
	Mo06538	Uncharacterized protein. (111 aa)
	Mo00259	Uncharacterized protein. (147 aa)
	Mo01105	Uncharacterized protein. (136 aa)
	Mo06470	Uncharacterized protein. (199 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00259	Mo01105	G7DSQ7	G7DV43	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00259	Mo06215	G7DSQ7	G7E8P6	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.998
Mo00259	Mo06470	G7DSQ7	G7EAA7	Uncharacterized protein.	Uncharacterized protein.	0.997
Mo00259	Mo06538	G7DSQ7	G7EAH5	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo01105	Mo00259	G7DV43	G7DSQ7	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo01105	Mo06215	G7DV43	G7E8P6	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.997
Mo01105	Mo06470	G7DV43	G7EAA7	Uncharacterized protein.	Uncharacterized protein.	0.997
Mo01105	Mo06538	G7DV43	G7EAH5	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo06215	Mo00259	G7E8P6	G7DSQ7	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.998
Mo06215	Mo01105	G7E8P6	G7DV43	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.997
Mo06215	Mo06470	G7E8P6	G7EAA7	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.997
Mo06215	Mo06538	G7E8P6	G7EAH5	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.998
Mo06470	Mo00259	G7EAA7	G7DSQ7	Uncharacterized protein.	Uncharacterized protein.	0.997
Mo06470	Mo01105	G7EAA7	G7DV43	Uncharacterized protein.	Uncharacterized protein.	0.997
Mo06470	Mo06215	G7EAA7	G7E8P6	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.997
Mo06470	Mo06538	G7EAA7	G7EAH5	Uncharacterized protein.	Uncharacterized protein.	0.996
Mo06538	Mo00259	G7EAH5	G7DSQ7	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo06538	Mo01105	G7EAH5	G7DV43	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo06538	Mo06215	G7EAH5	G7E8P6	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.998
Mo06538	Mo06470	G7EAH5	G7EAA7	Uncharacterized protein.	Uncharacterized protein.	0.996