Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Mo00075 | Mo01470 | G7DS74 | G7DW10 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein; Belongs to the cyclin family. | 0.972 |
| Mo00075 | Mo02196 | G7DS74 | G7DY81 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | PHD-type domain-containing protein. | 0.532 |
| Mo00075 | Mo03769 | G7DS74 | G7E2N4 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Med12 domain-containing protein. | 0.461 |
| Mo00075 | Mo03847 | G7DS74 | G7E2Z0 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.899 |
| Mo00075 | Mo06489 | G7DS74 | G7EAC6 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.534 |
| Mo00135 | Mo03421 | G7DSD4 | G7E1P0 | BHLH domain-containing protein. | Uncharacterized protein. | 0.773 |
| Mo00135 | Mo05987 | G7DSD4 | G7E9H3 | BHLH domain-containing protein. | BHLH domain-containing protein. | 0.912 |
| Mo00158 | Mo00980 | G7DSF7 | G7DUR9 | Uncharacterized protein. | Bromo domain-containing protein. | 0.504 |
| Mo00158 | Mo01599 | G7DSF7 | G7DWI4 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.488 |
| Mo00158 | Mo02287 | G7DSF7 | G7DYH1 | Uncharacterized protein. | SEC7 domain-containing protein. | 0.985 |
| Mo00158 | Mo02568 | G7DSF7 | G7DZA0 | Uncharacterized protein. | TPR_REGION domain-containing protein. | 0.483 |
| Mo00158 | Mo02945 | G7DSF7 | G7E0B9 | Uncharacterized protein. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.983 |
| Mo00158 | Mo03008 | G7DSF7 | G7E0I2 | Uncharacterized protein. | Uncharacterized protein. | 0.433 |
| Mo00158 | Mo03540 | G7DSF7 | G7E230 | Uncharacterized protein. | Uncharacterized protein. | 0.472 |
| Mo00158 | Mo03551 | G7DSF7 | G7E1W5 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.542 |
| Mo00158 | Mo05122 | G7DSF7 | G7E6H6 | Uncharacterized protein. | Plus3 domain-containing protein. | 0.945 |
| Mo00158 | Mo05892 | G7DSF7 | G7E981 | Uncharacterized protein. | Uncharacterized protein. | 0.942 |
| Mo00158 | Mo06014 | G7DSF7 | G7E9K0 | Uncharacterized protein. | CDC73_C domain-containing protein. | 0.947 |
| Mo00266 | Mo03421 | G7DSR4 | G7E1P0 | Uncharacterized protein. | Uncharacterized protein. | 0.643 |
| Mo00266 | Mo05987 | G7DSR4 | G7E9H3 | Uncharacterized protein. | BHLH domain-containing protein. | 0.912 |
page 1 of 25