15 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo04237	Uncharacterized protein. (399 aa)
	Mo00069	Uncharacterized protein. (1133 aa)
	Mo00347	TFIIB-type domain-containing protein. (362 aa)
	Mo00791	TAFII55_N domain-containing protein. (461 aa)
	Mo00873	Uncharacterized protein. (210 aa)
	Mo01474	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (163 aa)
	Mo01741	TFIID_20kDa domain-containing protein. (543 aa)
	Mo01963	TAFII28 domain-containing protein. (138 aa)
	Mo01972	Uncharacterized protein. (330 aa)
	Mo02177	CBFD_NFYB_HMF domain-containing protein. (221 aa)
	Mo02196	PHD-type domain-containing protein. (1211 aa)
	Mo03321	CBFD_NFYB_HMF domain-containing protein. (147 aa)
	Mo04632	TAF domain-containing protein. (511 aa)
	Mo04712	Uncharacterized protein. (180 aa)
	Mo05723	Uncharacterized protein. (585 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00069	Mo00347	G7DS68	G7DSZ2	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.978
Mo00069	Mo00791	G7DS68	G7DU83	Uncharacterized protein.	TAFII55_N domain-containing protein.	0.998
Mo00069	Mo00873	G7DS68	G7DUG4	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00069	Mo01474	G7DS68	G7DW14	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.998
Mo00069	Mo01741	G7DS68	G7DWY9	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.998
Mo00069	Mo01963	G7DS68	G7DXJ6	Uncharacterized protein.	TAFII28 domain-containing protein.	0.998
Mo00069	Mo01972	G7DS68	G7DXK5	Uncharacterized protein.	Uncharacterized protein.	0.793
Mo00069	Mo02196	G7DS68	G7DY81	Uncharacterized protein.	PHD-type domain-containing protein.	0.999
Mo00069	Mo04237	G7DS68	G7E3Z9	Uncharacterized protein.	Uncharacterized protein.	0.852
Mo00069	Mo04632	G7DS68	G7E542	Uncharacterized protein.	TAF domain-containing protein.	0.998
Mo00069	Mo04712	G7DS68	G7E5C2	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00069	Mo05723	G7DS68	G7E874	Uncharacterized protein.	Uncharacterized protein.	0.933
Mo00347	Mo00069	G7DSZ2	G7DS68	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.978
Mo00347	Mo00791	G7DSZ2	G7DU83	TFIIB-type domain-containing protein.	TAFII55_N domain-containing protein.	0.912
Mo00347	Mo00873	G7DSZ2	G7DUG4	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.974
Mo00347	Mo01474	G7DSZ2	G7DW14	TFIIB-type domain-containing protein.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.966
Mo00347	Mo01741	G7DSZ2	G7DWY9	TFIIB-type domain-containing protein.	TFIID_20kDa domain-containing protein.	0.948
Mo00347	Mo01963	G7DSZ2	G7DXJ6	TFIIB-type domain-containing protein.	TAFII28 domain-containing protein.	0.972
Mo00347	Mo01972	G7DSZ2	G7DXK5	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.978
Mo00347	Mo02177	G7DSZ2	G7DY62	TFIIB-type domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.633