10 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo05390	SANT domain-containing protein. (779 aa)
	Mo06048	TFIIB-type domain-containing protein. (636 aa)
	Mo01741	TFIID_20kDa domain-containing protein. (543 aa)
	Mo00069	Uncharacterized protein. (1133 aa)
	Mo05723	Uncharacterized protein. (585 aa)
	Mo03847	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (773 aa)
	Mo01636	WD_REPEATS_REGION domain-containing protein. (575 aa)
	Mo00347	TFIIB-type domain-containing protein. (362 aa)
	Mo03276	Uncharacterized protein. (1763 aa)
	Mo02979	TIP120 domain-containing protein. (1349 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00069	Mo00347	G7DS68	G7DSZ2	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.978
Mo00069	Mo01741	G7DS68	G7DWY9	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.998
Mo00069	Mo03276	G7DS68	G7E196	Uncharacterized protein.	Uncharacterized protein.	0.479
Mo00069	Mo03847	G7DS68	G7E2Z0	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.963
Mo00069	Mo05390	G7DS68	G7E792	Uncharacterized protein.	SANT domain-containing protein.	0.400
Mo00069	Mo05723	G7DS68	G7E874	Uncharacterized protein.	Uncharacterized protein.	0.933
Mo00347	Mo00069	G7DSZ2	G7DS68	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.978
Mo00347	Mo01741	G7DSZ2	G7DWY9	TFIIB-type domain-containing protein.	TFIID_20kDa domain-containing protein.	0.948
Mo00347	Mo03276	G7DSZ2	G7E196	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.583
Mo00347	Mo03847	G7DSZ2	G7E2Z0	TFIIB-type domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.992
Mo00347	Mo05723	G7DSZ2	G7E874	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.984
Mo00347	Mo06048	G7DSZ2	G7E9N4	TFIIB-type domain-containing protein.	TFIIB-type domain-containing protein.	0.452
Mo01636	Mo01741	G7DWM1	G7DWY9	WD_REPEATS_REGION domain-containing protein.	TFIID_20kDa domain-containing protein.	0.858
Mo01741	Mo00069	G7DWY9	G7DS68	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.998
Mo01741	Mo00347	G7DWY9	G7DSZ2	TFIID_20kDa domain-containing protein.	TFIIB-type domain-containing protein.	0.948
Mo01741	Mo01636	G7DWY9	G7DWM1	TFIID_20kDa domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.858
Mo01741	Mo03276	G7DWY9	G7E196	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.539
Mo01741	Mo03847	G7DWY9	G7E2Z0	TFIID_20kDa domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.872
Mo01741	Mo05723	G7DWY9	G7E874	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.886
Mo03276	Mo00069	G7E196	G7DS68	Uncharacterized protein.	Uncharacterized protein.	0.479