9 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo02307	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family. (625 aa)
	Mo02412	CIA30 domain-containing protein. (232 aa)
	Mo03634	Uncharacterized protein. (1190 aa)
	Mo02308	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family. (609 aa)
	Mo00105	Ubiquitin-like domain-containing protein. (331 aa)
	Mo00550	Uncharacterized protein. (872 aa)
	Mo05244	Uncharacterized protein. (903 aa)
	Mo05453	Uncharacterized protein. (746 aa)
	Mo02309	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family. (592 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00105	Mo00550	G7DSA4	G7DT25	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.577
Mo00105	Mo03634	G7DSA4	G7E2A0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.603
Mo00105	Mo05244	G7DSA4	G7E6U7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.577
Mo00105	Mo05453	G7DSA4	G7E7F5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.800
Mo00550	Mo00105	G7DT25	G7DSA4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.577
Mo00550	Mo02412	G7DT25	G7DYU5	Uncharacterized protein.	CIA30 domain-containing protein.	0.577
Mo00550	Mo05453	G7DT25	G7E7F5	Uncharacterized protein.	Uncharacterized protein.	0.773
Mo02412	Mo00550	G7DYU5	G7DT25	CIA30 domain-containing protein.	Uncharacterized protein.	0.577
Mo02412	Mo03634	G7DYU5	G7E2A0	CIA30 domain-containing protein.	Uncharacterized protein.	0.603
Mo02412	Mo05244	G7DYU5	G7E6U7	CIA30 domain-containing protein.	Uncharacterized protein.	0.577
Mo02412	Mo05453	G7DYU5	G7E7F5	CIA30 domain-containing protein.	Uncharacterized protein.	0.800
Mo03634	Mo00105	G7E2A0	G7DSA4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.603
Mo03634	Mo02412	G7E2A0	G7DYU5	Uncharacterized protein.	CIA30 domain-containing protein.	0.603
Mo03634	Mo05453	G7E2A0	G7E7F5	Uncharacterized protein.	Uncharacterized protein.	0.930
Mo05244	Mo00105	G7E6U7	G7DSA4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.577
Mo05244	Mo02412	G7E6U7	G7DYU5	Uncharacterized protein.	CIA30 domain-containing protein.	0.577
Mo05244	Mo05453	G7E6U7	G7E7F5	Uncharacterized protein.	Uncharacterized protein.	0.773
Mo05453	Mo00105	G7E7F5	G7DSA4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.800
Mo05453	Mo00550	G7E7F5	G7DT25	Uncharacterized protein.	Uncharacterized protein.	0.773
Mo05453	Mo02412	G7E7F5	G7DYU5	Uncharacterized protein.	CIA30 domain-containing protein.	0.800