29 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo06723	Uncharacterized protein. (1362 aa)
	Mo06504	Uncharacterized protein. (298 aa)
	Mo04848	Uncharacterized protein. (865 aa)
	Mo06538	Uncharacterized protein. (111 aa)
	Mo06560	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1327 aa)
	Mo00259	Uncharacterized protein. (147 aa)
	Mo00509	Uncharacterized protein. (331 aa)
	Mo01105	Uncharacterized protein. (136 aa)
	Mo01170	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (458 aa)
	Mo01441	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	Mo01756	Nuclear cap-binding protein subunit 2. (204 aa)
	Mo01895	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (143 aa)
	Mo02019	RING-type domain-containing protein. (370 aa)
	Mo02165	Uncharacterized protein. (966 aa)
	Mo02706	Uncharacterized protein. (157 aa)
	Mo03004	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2471 aa)
	Mo03367	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
	Mo03443	Helicase ATP-binding domain-containing protein. (797 aa)
	Mo03624	Uncharacterized protein. (636 aa)
	Mo03659	BSD domain-containing protein. (572 aa)
	Mo03714	CYCLIN domain-containing protein; Belongs to the cyclin family. (346 aa)
	Mo03847	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (773 aa)
	Mo04237	Uncharacterized protein. (399 aa)
	Mo04951	RPOLD domain-containing protein. (368 aa)
	Mo06489	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (367 aa)
	Mo06159	Uncharacterized protein. (207 aa)
	Mo06213	RNA_pol_L_2 domain-containing protein. (148 aa)
	Mo05318	mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (423 aa)
	Mo04965	mRNA cap guanine-N7 methyltransferase. (540 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00259	Mo00509	G7DSQ7	G7DTL6	Uncharacterized protein.	Uncharacterized protein.	0.970
Mo00259	Mo01105	G7DSQ7	G7DV43	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00259	Mo01170	G7DSQ7	G7DVA8	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.967
Mo00259	Mo01441	G7DSQ7	G7DW99	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
Mo00259	Mo01895	G7DSQ7	G7DXC9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
Mo00259	Mo02019	G7DSQ7	G7DXQ2	Uncharacterized protein.	RING-type domain-containing protein.	0.967
Mo00259	Mo02165	G7DSQ7	G7DY50	Uncharacterized protein.	Uncharacterized protein.	0.969
Mo00259	Mo02706	G7DSQ7	G7DZN5	Uncharacterized protein.	Uncharacterized protein.	0.824
Mo00259	Mo03004	G7DSQ7	G7E0H8	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
Mo00259	Mo03367	G7DSQ7	G7E1I6	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.967
Mo00259	Mo03443	G7DSQ7	G7E1R2	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.969
Mo00259	Mo03659	G7DSQ7	G7E2C5	Uncharacterized protein.	BSD domain-containing protein.	0.973
Mo00259	Mo03714	G7DSQ7	G7E2H9	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.924
Mo00259	Mo03847	G7DSQ7	G7E2Z0	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.980
Mo00259	Mo04237	G7DSQ7	G7E3Z9	Uncharacterized protein.	Uncharacterized protein.	0.976
Mo00259	Mo04951	G7DSQ7	G7E608	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
Mo00259	Mo05318	G7DSQ7	G7E721	Uncharacterized protein.	mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family.	0.687
Mo00259	Mo06159	G7DSQ7	G7E9Z1	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00259	Mo06213	G7DSQ7	G7E8P4	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
Mo00259	Mo06489	G7DSQ7	G7EAC6	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.857