18 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo02714	Cleavage and polyadenylation specificity factor subunit 2. (896 aa)
	Mo02183	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (197 aa)
	Mo01756	Nuclear cap-binding protein subunit 2. (204 aa)
	Mo01558	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (618 aa)
	Mo00628	Uncharacterized protein. (862 aa)
	Mo00148	Uncharacterized protein. (1378 aa)
	Mo04302	CPSF_A domain-containing protein. (1305 aa)
	Mo04388	Suf domain-containing protein. (842 aa)
	Mo04636	RRM domain-containing protein. (203 aa)
	Mo04653	Fip1 domain-containing protein. (514 aa)
	Mo04713	WD_REPEATS_REGION domain-containing protein. (815 aa)
	Mo04848	Uncharacterized protein. (865 aa)
	Mo05837	RRM domain-containing protein. (344 aa)
	Mo05877	CID domain-containing protein. (788 aa)
	Mo05900	Uncharacterized protein. (310 aa)
	Mo06742	Uncharacterized protein. (1127 aa)
	Mo03624	Uncharacterized protein. (636 aa)
	Mo03406	mRNA cleavage and polyadenylation factor Mo03406; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (514 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00148	Mo00628	G7DSE7	G7DTS1	Uncharacterized protein.	Uncharacterized protein.	0.960
Mo00148	Mo01558	G7DSE7	G7DWE3	Uncharacterized protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.990
Mo00148	Mo01756	G7DSE7	G7DX04	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.721
Mo00148	Mo02183	G7DSE7	G7DY68	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.818
Mo00148	Mo02714	G7DSE7	G7DZP3	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.998
Mo00148	Mo03406	G7DSE7	G7E1M5	Uncharacterized protein.	mRNA cleavage and polyadenylation factor Mo03406; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	0.900
Mo00148	Mo03624	G7DSE7	G7E290	Uncharacterized protein.	Uncharacterized protein.	0.657
Mo00148	Mo04302	G7DSE7	G7E464	Uncharacterized protein.	CPSF_A domain-containing protein.	0.995
Mo00148	Mo04388	G7DSE7	G7E4E9	Uncharacterized protein.	Suf domain-containing protein.	0.965
Mo00148	Mo04636	G7DSE7	G7E546	Uncharacterized protein.	RRM domain-containing protein.	0.779
Mo00148	Mo04653	G7DSE7	G7E563	Uncharacterized protein.	Fip1 domain-containing protein.	0.992
Mo00148	Mo04713	G7DSE7	G7E5C3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
Mo00148	Mo04848	G7DSE7	G7E5Q5	Uncharacterized protein.	Uncharacterized protein.	0.768
Mo00148	Mo05837	G7DSE7	G7E8I6	Uncharacterized protein.	RRM domain-containing protein.	0.990
Mo00148	Mo05877	G7DSE7	G7E966	Uncharacterized protein.	CID domain-containing protein.	0.988
Mo00148	Mo05900	G7DSE7	G7E988	Uncharacterized protein.	Uncharacterized protein.	0.993
Mo00148	Mo06742	G7DSE7	G7EB29	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00628	Mo00148	G7DTS1	G7DSE7	Uncharacterized protein.	Uncharacterized protein.	0.960
Mo00628	Mo01558	G7DTS1	G7DWE3	Uncharacterized protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.922
Mo00628	Mo01756	G7DTS1	G7DX04	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.805