35 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo03847	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (773 aa)
	Mo00259	Uncharacterized protein. (147 aa)
	Mo00343	Histone H2B; Belongs to the histone H2B family. (400 aa)
	Mo00411	Uncharacterized protein. (367 aa)
	Mo00645	WD_REPEATS_REGION domain-containing protein. (865 aa)
	Mo01105	Uncharacterized protein. (136 aa)
	Mo01254	Uncharacterized protein. (217 aa)
	Mo01441	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	Mo01810	Protein kinase domain-containing protein. (800 aa)
	Mo01895	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (143 aa)
	Mo02081	Uncharacterized protein. (1183 aa)
	Mo02225	Uncharacterized protein. (739 aa)
	Mo02260	Uncharacterized protein; Belongs to the cyclin family. (409 aa)
	Mo02628	HATPase_c domain-containing protein. (728 aa)
	Mo03004	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2471 aa)
	Mo03354	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1070 aa)
	Mo03382	Uncharacterized protein. (607 aa)
	Mo03551	Protein kinase domain-containing protein. (2080 aa)
	Mo03800	Uncharacterized protein; Belongs to the DEAD box helicase family. (559 aa)
	Mo03799	Uncharacterized protein; Belongs to the DEAD box helicase family. (480 aa)
	Mo03837	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (729 aa)
	Mo04237	Uncharacterized protein. (399 aa)
	Mo04608	GATA-type domain-containing protein. (1047 aa)
	Mo04615	Flavin_Reduct domain-containing protein. (200 aa)
	Mo04862	Serine/threonine-protein phosphatase. (632 aa)
	Mo04951	RPOLD domain-containing protein. (368 aa)
	Mo05427	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1413 aa)
	Mo05578	BHLH domain-containing protein. (262 aa)
	Mo05723	Uncharacterized protein. (585 aa)
	Mo06213	RNA_pol_L_2 domain-containing protein. (148 aa)
	Mo06159	Uncharacterized protein. (207 aa)
	Mo06504	Uncharacterized protein. (298 aa)
	Mo06531	GATA-type domain-containing protein. (903 aa)
	Mo06538	Uncharacterized protein. (111 aa)
	Mo06560	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1327 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00259	Mo00343	G7DSQ7	G7DSY8	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.935
Mo00259	Mo00411	G7DSQ7	G7DTB8	Uncharacterized protein.	Uncharacterized protein.	0.980
Mo00259	Mo01105	G7DSQ7	G7DV43	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00259	Mo01254	G7DSQ7	G7DVJ2	Uncharacterized protein.	Uncharacterized protein.	0.964
Mo00259	Mo01441	G7DSQ7	G7DW99	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
Mo00259	Mo01895	G7DSQ7	G7DXC9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
Mo00259	Mo02081	G7DSQ7	G7DXW7	Uncharacterized protein.	Uncharacterized protein.	0.630
Mo00259	Mo02260	G7DSQ7	G7DYE4	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.711
Mo00259	Mo03004	G7DSQ7	G7E0H8	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
Mo00259	Mo03551	G7DSQ7	G7E1W5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.627
Mo00259	Mo03799	G7DSQ7	G7E2R5	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.605
Mo00259	Mo03800	G7DSQ7	G7E2R4	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.605
Mo00259	Mo03847	G7DSQ7	G7E2Z0	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.980
Mo00259	Mo04237	G7DSQ7	G7E3Z9	Uncharacterized protein.	Uncharacterized protein.	0.976
Mo00259	Mo04951	G7DSQ7	G7E608	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
Mo00259	Mo05723	G7DSQ7	G7E874	Uncharacterized protein.	Uncharacterized protein.	0.966
Mo00259	Mo06159	G7DSQ7	G7E9Z1	Uncharacterized protein.	Uncharacterized protein.	0.998
Mo00259	Mo06213	G7DSQ7	G7E8P4	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
Mo00259	Mo06504	G7DSQ7	G7EAE1	Uncharacterized protein.	Uncharacterized protein.	0.999
Mo00259	Mo06538	G7DSQ7	G7EAH5	Uncharacterized protein.	Uncharacterized protein.	0.999