9 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo00735	Uncharacterized protein. (515 aa)
	Mo00502	Uncharacterized protein. (538 aa)
	Mo00264	RanBP2-type domain-containing protein. (703 aa)
	Mo00105	Ubiquitin-like domain-containing protein. (331 aa)
	Mo00044	Uncharacterized protein. (645 aa)
	Mo05453	Uncharacterized protein. (746 aa)
	Mo03676	RING-type domain-containing protein. (119 aa)
	Mo02412	CIA30 domain-containing protein. (232 aa)
	Mo02101	Uncharacterized protein; Belongs to the AAA ATPase family. (877 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00044	Mo00105	G7DS43	G7DSA4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.888
Mo00044	Mo00502	G7DS43	G7DTK9	Uncharacterized protein.	Uncharacterized protein.	0.936
Mo00044	Mo00735	G7DS43	G7DU28	Uncharacterized protein.	Uncharacterized protein.	0.622
Mo00044	Mo02101	G7DS43	G7DXY7	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.796
Mo00044	Mo02412	G7DS43	G7DYU5	Uncharacterized protein.	CIA30 domain-containing protein.	0.888
Mo00044	Mo03676	G7DS43	G7E2E2	Uncharacterized protein.	RING-type domain-containing protein.	0.716
Mo00044	Mo05453	G7DS43	G7E7F5	Uncharacterized protein.	Uncharacterized protein.	0.796
Mo00105	Mo00044	G7DSA4	G7DS43	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.888
Mo00105	Mo00264	G7DSA4	G7DSR2	Ubiquitin-like domain-containing protein.	RanBP2-type domain-containing protein.	0.950
Mo00105	Mo00502	G7DSA4	G7DTK9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.872
Mo00105	Mo00735	G7DSA4	G7DU28	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.890
Mo00105	Mo02101	G7DSA4	G7DXY7	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.872
Mo00105	Mo03676	G7DSA4	G7E2E2	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.898
Mo00105	Mo05453	G7DSA4	G7E7F5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.800
Mo00264	Mo00105	G7DSR2	G7DSA4	RanBP2-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.950
Mo00264	Mo00502	G7DSR2	G7DTK9	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.607
Mo00264	Mo00735	G7DSR2	G7DU28	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.998
Mo00264	Mo02101	G7DSR2	G7DXY7	RanBP2-type domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.998
Mo00264	Mo02412	G7DSR2	G7DYU5	RanBP2-type domain-containing protein.	CIA30 domain-containing protein.	0.950
Mo00264	Mo03676	G7DSR2	G7E2E2	RanBP2-type domain-containing protein.	RING-type domain-containing protein.	0.678