8 items (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Mo01750	Uncharacterized protein. (531 aa)
	Mo05791	Uncharacterized protein. (816 aa)
	Mo05560	Uncharacterized protein. (802 aa)
	Mo05427	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1413 aa)
	Mo05061	Non-specific serine/threonine protein kinase. (930 aa)
	Mo03523	Non-specific serine/threonine protein kinase. (1264 aa)
	Mo03335	Uncharacterized protein. (774 aa)
	Mo01656	Non-specific serine/threonine protein kinase. (563 aa)

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo01656	Mo01750	G7DWQ4	G7DWZ8	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.454
Mo01656	Mo03335	G7DWQ4	G7E1F4	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.433
Mo01656	Mo05427	G7DWQ4	G7E7C9	Non-specific serine/threonine protein kinase.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.420
Mo01656	Mo05560	G7DWQ4	G7E7R2	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.462
Mo01656	Mo05791	G7DWQ4	G7E8E2	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.613
Mo01750	Mo01656	G7DWZ8	G7DWQ4	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.454
Mo01750	Mo03523	G7DWZ8	G7E213	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.478
Mo01750	Mo05061	G7DWZ8	G7E6B5	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.465
Mo01750	Mo05791	G7DWZ8	G7E8E2	Uncharacterized protein.	Uncharacterized protein.	0.556
Mo03335	Mo01656	G7E1F4	G7DWQ4	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.433
Mo03335	Mo03523	G7E1F4	G7E213	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.451
Mo03335	Mo05061	G7E1F4	G7E6B5	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.459
Mo03523	Mo01750	G7E213	G7DWZ8	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.478
Mo03523	Mo03335	G7E213	G7E1F4	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.451
Mo03523	Mo05560	G7E213	G7E7R2	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.508
Mo03523	Mo05791	G7E213	G7E8E2	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.734
Mo05061	Mo01750	G7E6B5	G7DWZ8	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.465
Mo05061	Mo03335	G7E6B5	G7E1F4	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.459
Mo05061	Mo05560	G7E6B5	G7E7R2	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.494
Mo05061	Mo05791	G7E6B5	G7E8E2	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.626