(32 nodes) RNA polymerase III complex, and RNA Polymerase I Transcription Initiation network (Piloderma croceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0C3AIW2	TFIIB-type domain-containing protein. (657 aa)
	A0A0C3AWQ3	RPOL4c domain-containing protein. (222 aa)
	A0A0C3B3L9	Uncharacterized protein. (613 aa)
	A0A0C3BAI3	Uncharacterized protein. (369 aa)
	A0A0C3BCF7	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1207 aa)
	A0A0C3BGI3	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (161 aa)
	A0A0C3BMD9	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (541 aa)
	A0A0C3BQ83	SANT domain-containing protein. (557 aa)
	A0A0C3BTX4	Uncharacterized protein. (427 aa)
	A0A0C3BX08	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1143 aa)
	A0A0C3BXF9	Uncharacterized protein. (762 aa)
	A0A0C3BYP5	RNA_pol_L_2 domain-containing protein. (112 aa)
	A0A0C3C6T2	Uncharacterized protein. (288 aa)
	A0A0C3C8V5	Uncharacterized protein. (75 aa)
	A0A0C3C8V6	Uncharacterized protein. (85 aa)
	A0A0C3CKH6	Uncharacterized protein. (211 aa)
	A0A0C3CNK3	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (200 aa)
	A0A0C3EKE9	CHAT domain-containing protein. (1160 aa)
	A0A0C3EZ90	RPOLD domain-containing protein. (384 aa)
	A0A0C3FIT0	Uncharacterized protein. (208 aa)
	A0A0C3FMN3	TFIIS-type domain-containing protein. (70 aa)
	A0A0C3FPR7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
	A0A0C3FRQ4	RNA_pol_L_2 domain-containing protein. (111 aa)
	A0A0C3FV23	BTB domain-containing protein. (533 aa)
	A0A0C3FWT5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1404 aa)
	A0A0C3FWU3	Uncharacterized protein. (450 aa)
	A0A0C3G3Z5	Uncharacterized protein. (61 aa)
	A0A0C3G414	Uncharacterized protein. (813 aa)
	A0A0C3G4G1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1720 aa)
	A0A0C3GCP7	Uncharacterized protein. (212 aa)
	A0A0C3GDD6	Uncharacterized protein. (116 aa)
	A0A0C3GP70	Uncharacterized protein. (457 aa)

Your Current Organism:

Piloderma croceum

NCBI taxonomy Id: 765440
Other names: P. croceum F 1598, Piloderma croceum F 1598

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3AIW2	A0A0C3AWQ3	TFIIB-type domain-containing protein.	RPOL4c domain-containing protein.	0.978
A0A0C3AIW2	A0A0C3BCF7	TFIIB-type domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.920
A0A0C3AIW2	A0A0C3BGI3	TFIIB-type domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.940
A0A0C3AIW2	A0A0C3BMD9	TFIIB-type domain-containing protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.970
A0A0C3AIW2	A0A0C3BQ83	TFIIB-type domain-containing protein.	SANT domain-containing protein.	0.999
A0A0C3AIW2	A0A0C3BX08	TFIIB-type domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.986
A0A0C3AIW2	A0A0C3BYP5	TFIIB-type domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.929
A0A0C3AIW2	A0A0C3C6T2	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.941
A0A0C3AIW2	A0A0C3C8V5	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.879
A0A0C3AIW2	A0A0C3C8V6	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.879
A0A0C3AIW2	A0A0C3CKH6	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.957
A0A0C3AIW2	A0A0C3CNK3	TFIIB-type domain-containing protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.948
A0A0C3AIW2	A0A0C3EKE9	TFIIB-type domain-containing protein.	CHAT domain-containing protein.	0.879
A0A0C3AIW2	A0A0C3EZ90	TFIIB-type domain-containing protein.	RPOLD domain-containing protein.	0.969
A0A0C3AIW2	A0A0C3FIT0	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.937
A0A0C3AIW2	A0A0C3FMN3	TFIIB-type domain-containing protein.	TFIIS-type domain-containing protein.	0.942
A0A0C3AIW2	A0A0C3FPR7	TFIIB-type domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.793
A0A0C3AIW2	A0A0C3FRQ4	TFIIB-type domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.929
A0A0C3AIW2	A0A0C3FWT5	TFIIB-type domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.986
A0A0C3AIW2	A0A0C3FWU3	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.963