(47 nodes) Mixed, incl. Kyakuja-Dileera-Zisupton transposase, and Plavaka transposase network (Piloderma croceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0C3AG01	Uncharacterized protein. (582 aa)
	A0A0C3AK74	Uncharacterized protein. (140 aa)
	A0A0C3AM23	Uncharacterized protein. (107 aa)
	A0A0C3AX34	Uncharacterized protein. (462 aa)
	A0A0C3B1A1	CxC2 domain-containing protein. (776 aa)
	A0A0C3B1C6	Uncharacterized protein. (101 aa)
	A0A0C3B2L6	Uncharacterized protein. (256 aa)
	A0A0C3B3K5	Uncharacterized protein. (115 aa)
	A0A0C3BA64	Uncharacterized protein. (667 aa)
	A0A0C3BC31	CCHC-type domain-containing protein. (684 aa)
	A0A0C3BFP1	Uncharacterized protein. (348 aa)
	A0A0C3BJG2	Uncharacterized protein. (841 aa)
	A0A0C3BLV9	Uncharacterized protein. (910 aa)
	A0A0C3BMP0	Uncharacterized protein. (104 aa)
	A0A0C3BRM5	Uncharacterized protein. (89 aa)
	A0A0C3BX02	Uncharacterized protein. (604 aa)
	A0A0C3BZW4	Uncharacterized protein. (362 aa)
	A0A0C3C838	Uncharacterized protein. (83 aa)
	A0A0C3CFI0	Uncharacterized protein. (326 aa)
	A0A0C3EE29	Uncharacterized protein. (243 aa)
	A0A0C3EE77	Uncharacterized protein. (396 aa)
	A0A0C3EH69	Uncharacterized protein. (166 aa)
	A0A0C3EK11	Uncharacterized protein. (303 aa)
	A0A0C3EKC2	Uncharacterized protein. (213 aa)
	A0A0C3ESW8	Uncharacterized protein. (342 aa)
	A0A0C3EUG0	Integrase_H2C2 domain-containing protein. (1319 aa)
	A0A0C3EUL3	Uncharacterized protein. (119 aa)
	A0A0C3EVL3	Uncharacterized protein. (159 aa)
	A0A0C3EX12	Uncharacterized protein. (248 aa)
	A0A0C3F0B0	CxC2 domain-containing protein. (1017 aa)
	A0A0C3F0P9	Uncharacterized protein. (576 aa)
	A0A0C3F2I5	Uncharacterized protein. (335 aa)
	A0A0C3F4G7	CxC2 domain-containing protein. (453 aa)
	A0A0C3F5C3	Asp_protease domain-containing protein. (525 aa)
	A0A0C3F705	Uncharacterized protein. (277 aa)
	A0A0C3F7M1	Uncharacterized protein. (161 aa)
	A0A0C3F9S8	Uncharacterized protein. (773 aa)
	A0A0C3FA13	CxC2 domain-containing protein. (575 aa)
	A0A0C3FAS2	CxC2 domain-containing protein. (824 aa)
	A0A0C3FEX6	Uncharacterized protein. (82 aa)
	A0A0C3FS73	Uncharacterized protein. (93 aa)
	A0A0C3FU86	Uncharacterized protein. (554 aa)
	A0A0C3FVH6	Uncharacterized protein. (104 aa)
	A0A0C3FWR6	Uncharacterized protein. (109 aa)
	A0A0C3G526	Uncharacterized protein. (270 aa)
	A0A0C3G9J4	CxC2 domain-containing protein. (1289 aa)
	A0A0C3GBE5	CxC2 domain-containing protein. (251 aa)

Your Current Organism:

Piloderma croceum

NCBI taxonomy Id: 765440
Other names: P. croceum F 1598, Piloderma croceum F 1598

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3AG01	A0A0C3AM23	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A0C3AG01	A0A0C3EH69	Uncharacterized protein.	Uncharacterized protein.	0.400
A0A0C3AK74	A0A0C3B2L6	Uncharacterized protein.	Uncharacterized protein.	0.409
A0A0C3AK74	A0A0C3EE29	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A0C3AK74	A0A0C3EKC2	Uncharacterized protein.	Uncharacterized protein.	0.473
A0A0C3AK74	A0A0C3EUL3	Uncharacterized protein.	Uncharacterized protein.	0.500
A0A0C3AK74	A0A0C3F7M1	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A0C3AK74	A0A0C3FS73	Uncharacterized protein.	Uncharacterized protein.	0.447
A0A0C3AM23	A0A0C3AG01	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A0C3AM23	A0A0C3B1A1	Uncharacterized protein.	CxC2 domain-containing protein.	0.405
A0A0C3AM23	A0A0C3B1C6	Uncharacterized protein.	Uncharacterized protein.	0.490
A0A0C3AM23	A0A0C3B2L6	Uncharacterized protein.	Uncharacterized protein.	0.433
A0A0C3AM23	A0A0C3BFP1	Uncharacterized protein.	Uncharacterized protein.	0.419
A0A0C3AM23	A0A0C3C838	Uncharacterized protein.	Uncharacterized protein.	0.415
A0A0C3AM23	A0A0C3EE29	Uncharacterized protein.	Uncharacterized protein.	0.462
A0A0C3AM23	A0A0C3EKC2	Uncharacterized protein.	Uncharacterized protein.	0.475
A0A0C3AM23	A0A0C3EUL3	Uncharacterized protein.	Uncharacterized protein.	0.455
A0A0C3AM23	A0A0C3FEX6	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A0C3AM23	A0A0C3GBE5	Uncharacterized protein.	CxC2 domain-containing protein.	0.409
A0A0C3B1A1	A0A0C3AM23	CxC2 domain-containing protein.	Uncharacterized protein.	0.405