(18 nodes) Mixed, incl. NMS complex, and LAG1, DNA binding network (Piloderma croceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0C3ADK8	Uncharacterized protein. (360 aa)
	A0A0C3AN93	Uncharacterized protein. (721 aa)
	A0A0C3B0Z6	Uncharacterized protein. (252 aa)
	A0A0C3B7M2	Uncharacterized protein. (237 aa)
	A0A0C3B7N1	Uncharacterized protein. (443 aa)
	A0A0C3BK80	Uncharacterized protein. (612 aa)
	A0A0C3BU51	DUF5595 domain-containing protein. (640 aa)
	A0A0C3CDB2	DHR10 domain-containing protein. (445 aa)
	A0A0C3CPR1	PH domain-containing protein. (1511 aa)
	A0A0C3ES18	Uncharacterized protein. (133 aa)
	A0A0C3F324	Uncharacterized protein. (1028 aa)
	A0A0C3F6N5	Uncharacterized protein. (740 aa)
	A0A0C3FAA6	Uncharacterized protein. (745 aa)
	A0A0C3FM20	Uncharacterized protein. (196 aa)
	A0A0C3FRG2	Uncharacterized protein. (249 aa)
	A0A0C3G059	Spc7 domain-containing protein. (1181 aa)
	A0A0C3G8V9	Uncharacterized protein. (178 aa)
	A0A0C3GBG9	Uncharacterized protein. (524 aa)

Your Current Organism:

Piloderma croceum

NCBI taxonomy Id: 765440
Other names: P. croceum F 1598, Piloderma croceum F 1598

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3ADK8	A0A0C3AN93	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3ADK8	A0A0C3CDB2	Uncharacterized protein.	DHR10 domain-containing protein.	0.414
A0A0C3ADK8	A0A0C3ES18	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3ADK8	A0A0C3F324	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3ADK8	A0A0C3F6N5	Uncharacterized protein.	Uncharacterized protein.	0.661
A0A0C3ADK8	A0A0C3FM20	Uncharacterized protein.	Uncharacterized protein.	0.574
A0A0C3AN93	A0A0C3ADK8	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3AN93	A0A0C3B0Z6	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3AN93	A0A0C3B7M2	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A0C3AN93	A0A0C3B7N1	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3AN93	A0A0C3BK80	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3AN93	A0A0C3CPR1	Uncharacterized protein.	PH domain-containing protein.	0.817
A0A0C3AN93	A0A0C3F324	Uncharacterized protein.	Uncharacterized protein.	0.406
A0A0C3AN93	A0A0C3FAA6	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3AN93	A0A0C3G059	Uncharacterized protein.	Spc7 domain-containing protein.	0.817
A0A0C3AN93	A0A0C3G8V9	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3AN93	A0A0C3GBG9	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A0C3B0Z6	A0A0C3AN93	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3B0Z6	A0A0C3CDB2	Uncharacterized protein.	DHR10 domain-containing protein.	0.414
A0A0C3B0Z6	A0A0C3ES18	Uncharacterized protein.	Uncharacterized protein.	0.817