(5 nodes) Seh1-associated complex network (Piloderma croceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0C3AML9	WD_REPEATS_REGION domain-containing protein. (1350 aa)
	A0A0C3FX99	Uncharacterized protein. (771 aa)
	A0A0C3FYT5	Uncharacterized protein. (1030 aa)
	A0A0C3G6L3	DEP domain-containing protein. (1569 aa)
	A0A0C3G9E0	Uncharacterized protein. (643 aa)

Your Current Organism:

Piloderma croceum

NCBI taxonomy Id: 765440
Other names: P. croceum F 1598, Piloderma croceum F 1598

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3AML9	A0A0C3FX99	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.996
A0A0C3AML9	A0A0C3FYT5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998
A0A0C3AML9	A0A0C3G6L3	WD_REPEATS_REGION domain-containing protein.	DEP domain-containing protein.	0.996
A0A0C3AML9	A0A0C3G9E0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.996
A0A0C3FX99	A0A0C3AML9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0A0C3FX99	A0A0C3FYT5	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A0C3FX99	A0A0C3G6L3	Uncharacterized protein.	DEP domain-containing protein.	0.999
A0A0C3FX99	A0A0C3G9E0	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A0C3FYT5	A0A0C3AML9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
A0A0C3FYT5	A0A0C3FX99	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A0C3FYT5	A0A0C3G6L3	Uncharacterized protein.	DEP domain-containing protein.	0.996
A0A0C3FYT5	A0A0C3G9E0	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A0C3G6L3	A0A0C3AML9	DEP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0A0C3G6L3	A0A0C3FX99	DEP domain-containing protein.	Uncharacterized protein.	0.999
A0A0C3G6L3	A0A0C3FYT5	DEP domain-containing protein.	Uncharacterized protein.	0.996
A0A0C3G6L3	A0A0C3G9E0	DEP domain-containing protein.	Uncharacterized protein.	0.996
A0A0C3G9E0	A0A0C3AML9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0A0C3G9E0	A0A0C3FX99	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A0C3G9E0	A0A0C3FYT5	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A0C3G9E0	A0A0C3G6L3	Uncharacterized protein.	DEP domain-containing protein.	0.996