(63 nodes) Mixed, incl. Mitotic recombination, and DNA strand elongation network (Piloderma croceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0C3ABA8	Uncharacterized protein. (189 aa)
	A0A0C3ACS7	Uncharacterized protein. (275 aa)
	A0A0C3AEH6	Uncharacterized protein. (131 aa)
	A0A0C3AG52	OB domain-containing protein. (135 aa)
	A0A0C3AG94	AAA_12 domain-containing protein. (390 aa)
	A0A0C3AL50	Uncharacterized protein. (605 aa)
	A0A0C3AS08	Uncharacterized protein. (381 aa)
	A0A0C3AU51	XPGI domain-containing protein. (196 aa)
	A0A0C3B298	ERCC4 domain-containing protein. (808 aa)
	A0A0C3B662	Uncharacterized protein. (1218 aa)
	A0A0C3BAB6	Uncharacterized protein. (534 aa)
	A0A0C3BBR7	ERCC4 domain-containing protein. (929 aa)
	A0A0C3BDB7	AAA domain-containing protein. (356 aa)
	A0A0C3BGB8	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1974 aa)
	A0A0C3BJS6	Uncharacterized protein. (419 aa)
	A0A0C3BL59	Uncharacterized protein. (276 aa)
	A0A0C3BLZ1	Uncharacterized protein. (626 aa)
	A0A0C3BMJ1	Uncharacterized protein. (1095 aa)
	A0A0C3BR28	BRCA-2_OB1 domain-containing protein. (1095 aa)
	A0A0C3BRW6	Uncharacterized protein. (189 aa)
	A0A0C3BU16	AAA domain-containing protein. (371 aa)
	A0A0C3BUE9	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (606 aa)
	A0A0C3BV80	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3088 aa)
	A0A0C3BZK0	XPGI domain-containing protein. (842 aa)
	A0A0C3C422	RECA_2 domain-containing protein. (316 aa)
	A0A0C3C6P3	Rad51 domain-containing protein. (374 aa)
	A0A0C3CCS9	Uncharacterized protein. (364 aa)
	A0A0C3CP85	Uncharacterized protein. (636 aa)
	A0A0C3CQ20	Uncharacterized protein. (246 aa)
	A0A0C3EJM8	Dna2 domain-containing protein. (310 aa)
	A0A0C3EK15	Uncharacterized protein. (470 aa)
	A0A0C3EKZ5	Uncharacterized protein. (1206 aa)
	A0A0C3ERF6	AAA_12 domain-containing protein. (88 aa)
	A0A0C3EVE0	Uncharacterized protein. (54 aa)
	A0A0C3EWW5	SAE2 domain-containing protein. (647 aa)
	A0A0C3EXZ9	AAA_11 domain-containing protein. (304 aa)
	A0A0C3EY73	XPGI domain-containing protein. (522 aa)
	A0A0C3EZC4	DUF1767 domain-containing protein. (175 aa)
	A0A0C3F2G3	RFC1 domain-containing protein. (420 aa)
	A0A0C3F498	Checkpoint protein; Belongs to the HUS1 family. (285 aa)
	A0A0C3F5L0	Uncharacterized protein. (73 aa)
	A0A0C3F5Y5	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (700 aa)
	A0A0C3F5Z4	Rad51 domain-containing protein. (143 aa)
	A0A0C3F643	Uncharacterized protein. (353 aa)
	A0A0C3FDR2	Replication factor C subunit 1. (989 aa)
	A0A0C3FNV7	RECA_2 domain-containing protein. (475 aa)
	A0A0C3FP30	DEAD domain-containing protein. (148 aa)
	A0A0C3FQS5	XPGN domain-containing protein. (551 aa)
	A0A0C3FS79	Uncharacterized protein. (148 aa)
	A0A0C3FSI5	Carbohydrate esterase family 16 protein. (293 aa)
	A0A0C3FUZ3	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (618 aa)
	A0A0C3FY00	XPA_C domain-containing protein. (210 aa)
	A0A0C3G1Z3	AAA domain-containing protein. (355 aa)
	A0A0C3G2W1	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (616 aa)
	A0A0C3G600	Uncharacterized protein. (782 aa)
	A0A0C3G656	Helicase ATP-binding domain-containing protein. (149 aa)
	A0A0C3G6B8	Uncharacterized protein. (1102 aa)
	A0A0C3G7L8	Uncharacterized protein. (625 aa)
	A0A0C3G7Z3	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (708 aa)
	A0A0C3GA73	AAA domain-containing protein. (345 aa)
	A0A0C3GA94	Uncharacterized protein. (94 aa)
	A0A0C3GD82	Uncharacterized protein. (634 aa)
	A0A0C3GPE7	3'-5' exonuclease domain-containing protein. (490 aa)

Your Current Organism:

Piloderma croceum

NCBI taxonomy Id: 765440
Other names: P. croceum F 1598, Piloderma croceum F 1598

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3ABA8	A0A0C3ACS7	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A0C3ABA8	A0A0C3AEH6	Uncharacterized protein.	Uncharacterized protein.	0.783
A0A0C3ABA8	A0A0C3AG52	Uncharacterized protein.	OB domain-containing protein.	0.759
A0A0C3ABA8	A0A0C3AG94	Uncharacterized protein.	AAA_12 domain-containing protein.	0.783
A0A0C3ABA8	A0A0C3AL50	Uncharacterized protein.	Uncharacterized protein.	0.667
A0A0C3ABA8	A0A0C3AS08	Uncharacterized protein.	Uncharacterized protein.	0.661
A0A0C3ABA8	A0A0C3B298	Uncharacterized protein.	ERCC4 domain-containing protein.	0.715
A0A0C3ABA8	A0A0C3B662	Uncharacterized protein.	Uncharacterized protein.	0.667
A0A0C3ABA8	A0A0C3BAB6	Uncharacterized protein.	Uncharacterized protein.	0.859
A0A0C3ABA8	A0A0C3BBR7	Uncharacterized protein.	ERCC4 domain-containing protein.	0.715
A0A0C3ABA8	A0A0C3BDB7	Uncharacterized protein.	AAA domain-containing protein.	0.864
A0A0C3ABA8	A0A0C3BGB8	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.781
A0A0C3ABA8	A0A0C3BJS6	Uncharacterized protein.	Uncharacterized protein.	0.667
A0A0C3ABA8	A0A0C3BL59	Uncharacterized protein.	Uncharacterized protein.	0.759
A0A0C3ABA8	A0A0C3BLZ1	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A0C3ABA8	A0A0C3BMJ1	Uncharacterized protein.	Uncharacterized protein.	0.667
A0A0C3ABA8	A0A0C3BR28	Uncharacterized protein.	BRCA-2_OB1 domain-containing protein.	0.710
A0A0C3ABA8	A0A0C3BRW6	Uncharacterized protein.	Uncharacterized protein.	0.908
A0A0C3ABA8	A0A0C3BU16	Uncharacterized protein.	AAA domain-containing protein.	0.865
A0A0C3ABA8	A0A0C3BUE9	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.661