(5 nodes) Nucleotide-excision repair factor 1 complex network (Piloderma croceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0C3B298	ERCC4 domain-containing protein. (808 aa)
	A0A0C3EKZ5	Uncharacterized protein. (1206 aa)
	A0A0C3F643	Uncharacterized protein. (353 aa)
	A0A0C3FS79	Uncharacterized protein. (148 aa)
	A0A0C3FY00	XPA_C domain-containing protein. (210 aa)

Your Current Organism:

Piloderma croceum

NCBI taxonomy Id: 765440
Other names: P. croceum F 1598, Piloderma croceum F 1598

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3B298	A0A0C3EKZ5	ERCC4 domain-containing protein.	Uncharacterized protein.	0.810
A0A0C3B298	A0A0C3F643	ERCC4 domain-containing protein.	Uncharacterized protein.	0.939
A0A0C3B298	A0A0C3FS79	ERCC4 domain-containing protein.	Uncharacterized protein.	0.856
A0A0C3B298	A0A0C3FY00	ERCC4 domain-containing protein.	XPA_C domain-containing protein.	0.931
A0A0C3EKZ5	A0A0C3B298	Uncharacterized protein.	ERCC4 domain-containing protein.	0.810
A0A0C3EKZ5	A0A0C3F643	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A0C3EKZ5	A0A0C3FS79	Uncharacterized protein.	Uncharacterized protein.	0.810
A0A0C3EKZ5	A0A0C3FY00	Uncharacterized protein.	XPA_C domain-containing protein.	0.921
A0A0C3F643	A0A0C3B298	Uncharacterized protein.	ERCC4 domain-containing protein.	0.939
A0A0C3F643	A0A0C3EKZ5	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A0C3F643	A0A0C3FS79	Uncharacterized protein.	Uncharacterized protein.	0.939
A0A0C3F643	A0A0C3FY00	Uncharacterized protein.	XPA_C domain-containing protein.	0.988
A0A0C3FS79	A0A0C3B298	Uncharacterized protein.	ERCC4 domain-containing protein.	0.856
A0A0C3FS79	A0A0C3EKZ5	Uncharacterized protein.	Uncharacterized protein.	0.810
A0A0C3FS79	A0A0C3F643	Uncharacterized protein.	Uncharacterized protein.	0.939
A0A0C3FS79	A0A0C3FY00	Uncharacterized protein.	XPA_C domain-containing protein.	0.931
A0A0C3FY00	A0A0C3B298	XPA_C domain-containing protein.	ERCC4 domain-containing protein.	0.931
A0A0C3FY00	A0A0C3EKZ5	XPA_C domain-containing protein.	Uncharacterized protein.	0.921
A0A0C3FY00	A0A0C3F643	XPA_C domain-containing protein.	Uncharacterized protein.	0.988
A0A0C3FY00	A0A0C3FS79	XPA_C domain-containing protein.	Uncharacterized protein.	0.931