(26 nodes) Protein-tyrosine phosphatase-like network (Piloderma croceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0C3FF02	Uncharacterized protein. (227 aa)
	A0A0C3EMN0	TYR_PHOSPHATASE_2 domain-containing protein. (545 aa)
	A0A0C3F4R7	Myotubularin phosphatase domain-containing protein. (912 aa)
	A0A0C3F532	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (183 aa)
	A0A0C3F6R1	Uncharacterized protein. (1320 aa)
	A0A0C3F867	TYR_PHOSPHATASE_2 domain-containing protein. (85 aa)
	A0A0C3FB56	TYR_PHOSPHATASE_2 domain-containing protein. (213 aa)
	A0A0C3FCP0	Uncharacterized protein. (485 aa)
	A0A0C3FVJ9	Uncharacterized protein. (181 aa)
	A0A0C3FX40	Uncharacterized protein. (381 aa)
	A0A0C3FYF9	Uncharacterized protein. (1260 aa)
	A0A0C3G038	Uncharacterized protein. (688 aa)
	A0A0C3G061	Uncharacterized protein. (655 aa)
	A0A0C3G1N7	Phosphatase tensin-type domain-containing protein. (616 aa)
	A0A0C3G2J8	Uncharacterized protein. (233 aa)
	A0A0C3G4Q1	TYR_PHOSPHATASE_2 domain-containing protein. (273 aa)
	PILCRDRAFT_659	Uncharacterized protein. (222 aa)
	A0A0C3GEF2	Uncharacterized protein. (822 aa)
	A0A0C3GF95	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (174 aa)
	A0A0C3GJ50	Uncharacterized protein. (582 aa)
	A0A0C3GKH1	Uncharacterized protein. (175 aa)
	A0A0C3AJ68	Uncharacterized protein. (435 aa)
	A0A0C3BDT6	Uncharacterized protein. (166 aa)
	A0A0C3BH28	TYR_PHOSPHATASE_2 domain-containing protein. (288 aa)
	A0A0C3BJC2	Uncharacterized protein. (150 aa)
	A0A0C3C3Q1	Uncharacterized protein. (1493 aa)

Your Current Organism:

Piloderma croceum

NCBI taxonomy Id: 765440
Other names: P. croceum F 1598, Piloderma croceum F 1598

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3AJ68	A0A0C3FX40	Uncharacterized protein.	Uncharacterized protein.	0.546
A0A0C3AJ68	A0A0C3FYF9	Uncharacterized protein.	Uncharacterized protein.	0.595
A0A0C3AJ68	A0A0C3G061	Uncharacterized protein.	Uncharacterized protein.	0.508
A0A0C3AJ68	A0A0C3GKH1	Uncharacterized protein.	Uncharacterized protein.	0.415
A0A0C3BDT6	A0A0C3FX40	Uncharacterized protein.	Uncharacterized protein.	0.546
A0A0C3BDT6	A0A0C3FYF9	Uncharacterized protein.	Uncharacterized protein.	0.595
A0A0C3BDT6	A0A0C3G061	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A0C3BJC2	A0A0C3F532	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.440
A0A0C3BJC2	A0A0C3FVJ9	Uncharacterized protein.	Uncharacterized protein.	0.431
A0A0C3BJC2	A0A0C3FX40	Uncharacterized protein.	Uncharacterized protein.	0.554
A0A0C3BJC2	A0A0C3FYF9	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A0C3BJC2	A0A0C3G2J8	Uncharacterized protein.	Uncharacterized protein.	0.443
A0A0C3BJC2	A0A0C3GF95	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.440
A0A0C3F4R7	A0A0C3F867	Myotubularin phosphatase domain-containing protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.433
A0A0C3F4R7	A0A0C3G1N7	Myotubularin phosphatase domain-containing protein.	Phosphatase tensin-type domain-containing protein.	0.518
A0A0C3F532	A0A0C3BJC2	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Uncharacterized protein.	0.440
A0A0C3F532	A0A0C3FX40	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Uncharacterized protein.	0.546
A0A0C3F532	A0A0C3FYF9	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Uncharacterized protein.	0.595
A0A0C3F532	A0A0C3G061	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Uncharacterized protein.	0.508
A0A0C3F532	A0A0C3GKH1	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Uncharacterized protein.	0.431