(14 nodes) DNA-directed RNA polymerase, subunit beta-prime network (Piloderma croceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0C3FQ07	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1752 aa)
	A0A0C3FLV4	Uncharacterized protein. (295 aa)
	A0A0C3FE01	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (469 aa)
	A0A0C3B2Q9	RPOLA_N domain-containing protein. (248 aa)
	A0A0C3B3C7	Uncharacterized protein. (112 aa)
	A0A0C3B5Z4	RNA_pol_Rpb1_3 domain-containing protein. (235 aa)
	A0A0C3BC64	RNA_pol_Rpb1_5 domain-containing protein. (121 aa)
	A0A0C3BGF0	RNA_pol_Rpb1_1 domain-containing protein. (163 aa)
	A0A0C3BPP7	Uncharacterized protein. (243 aa)
	A0A0C3G4G1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1720 aa)
	A0A0C3G0B4	Uncharacterized protein. (611 aa)
	A0A0C3FWT5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1404 aa)
	A0A0C3EZT3	RNA_pol_Rpb1_5 domain-containing protein. (181 aa)
	A0A0C3F901	RPOLA_N domain-containing protein. (170 aa)

Your Current Organism:

Piloderma croceum

NCBI taxonomy Id: 765440
Other names: P. croceum F 1598, Piloderma croceum F 1598

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3B2Q9	A0A0C3B3C7	RPOLA_N domain-containing protein.	Uncharacterized protein.	0.924
A0A0C3B2Q9	A0A0C3BC64	RPOLA_N domain-containing protein.	RNA_pol_Rpb1_5 domain-containing protein.	0.584
A0A0C3B2Q9	A0A0C3BGF0	RPOLA_N domain-containing protein.	RNA_pol_Rpb1_1 domain-containing protein.	0.787
A0A0C3B2Q9	A0A0C3BPP7	RPOLA_N domain-containing protein.	Uncharacterized protein.	0.933
A0A0C3B2Q9	A0A0C3EZT3	RPOLA_N domain-containing protein.	RNA_pol_Rpb1_5 domain-containing protein.	0.883
A0A0C3B2Q9	A0A0C3FLV4	RPOLA_N domain-containing protein.	Uncharacterized protein.	0.929
A0A0C3B2Q9	A0A0C3G0B4	RPOLA_N domain-containing protein.	Uncharacterized protein.	0.866
A0A0C3B3C7	A0A0C3B2Q9	Uncharacterized protein.	RPOLA_N domain-containing protein.	0.924
A0A0C3B3C7	A0A0C3B5Z4	Uncharacterized protein.	RNA_pol_Rpb1_3 domain-containing protein.	0.813
A0A0C3B3C7	A0A0C3BC64	Uncharacterized protein.	RNA_pol_Rpb1_5 domain-containing protein.	0.692
A0A0C3B3C7	A0A0C3BGF0	Uncharacterized protein.	RNA_pol_Rpb1_1 domain-containing protein.	0.700
A0A0C3B3C7	A0A0C3BPP7	Uncharacterized protein.	Uncharacterized protein.	0.935
A0A0C3B3C7	A0A0C3EZT3	Uncharacterized protein.	RNA_pol_Rpb1_5 domain-containing protein.	0.829
A0A0C3B3C7	A0A0C3F901	Uncharacterized protein.	RPOLA_N domain-containing protein.	0.528
A0A0C3B3C7	A0A0C3FE01	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.874
A0A0C3B3C7	A0A0C3FLV4	Uncharacterized protein.	Uncharacterized protein.	0.918
A0A0C3B5Z4	A0A0C3B3C7	RNA_pol_Rpb1_3 domain-containing protein.	Uncharacterized protein.	0.813
A0A0C3B5Z4	A0A0C3BC64	RNA_pol_Rpb1_3 domain-containing protein.	RNA_pol_Rpb1_5 domain-containing protein.	0.466
A0A0C3B5Z4	A0A0C3BGF0	RNA_pol_Rpb1_3 domain-containing protein.	RNA_pol_Rpb1_1 domain-containing protein.	0.833
A0A0C3B5Z4	A0A0C3BPP7	RNA_pol_Rpb1_3 domain-containing protein.	Uncharacterized protein.	0.584