(35 nodes) Ether lipid metabolism network (Piloderma croceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0C3G262	GYF domain-containing protein. (1213 aa)
	A0A0C3G893	PLD phosphodiesterase domain-containing protein. (162 aa)
	A0A0C3GI49	Uncharacterized protein. (710 aa)
	A0A0C3AHL5	Uncharacterized protein. (416 aa)
	A0A0C3AIU8	Phospholipase. (844 aa)
	A0A0C3AWA1	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (354 aa)
	PAC1	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. (436 aa)
	A0A0C3B4W0	Uncharacterized protein. (408 aa)
	A0A0C3B7I8	Uncharacterized protein. (430 aa)
	A0A0C3BLT5	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (353 aa)
	A0A0C3BNA7	PLD phosphodiesterase domain-containing protein. (472 aa)
	A0A0C3BS76	Phospholipase. (1332 aa)
	A0A0C3BX88	Uncharacterized protein. (359 aa)
	A0A0C3BXC2	Uncharacterized protein. (481 aa)
	A0A0C3BY16	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (423 aa)
	A0A0C3BZL5	Uncharacterized protein. (422 aa)
	A0A0C3C316	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family. (505 aa)
	A0A0C3C708	Uncharacterized protein. (1490 aa)
	A0A0C3CL70	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (286 aa)
	A0A0C3CMC7	PNPLA domain-containing protein. (531 aa)
	A0A0C3CN60	Uncharacterized protein. (490 aa)
	A0A0C3EU03	PLD phosphodiesterase domain-containing protein. (419 aa)
	A0A0C3F7U1	Putative phospholipase. (432 aa)
	A0A0C3F9R6	SWIB domain-containing protein. (267 aa)
	A0A0C3FEI9	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (336 aa)
	A0A0C3FF00	CRAL-TRIO domain-containing protein. (314 aa)
	A0A0C3FI88	CRAL-TRIO domain-containing protein. (312 aa)
	PAC1-2	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. (437 aa)
	A0A0C3FIJ0	WD_REPEATS_REGION domain-containing protein. (174 aa)
	A0A0C3FPR3	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (287 aa)
	A0A0C3FUA7	Uncharacterized protein. (198 aa)
	A0A0C3FXC3	Uncharacterized protein. (1097 aa)
	A0A0C3FYS8	CRAL-TRIO domain-containing protein. (340 aa)
	A0A0C3G016	GYF domain-containing protein. (1415 aa)
	A0A0C3G3F1	JmjC domain-containing protein. (357 aa)

Your Current Organism:

Piloderma croceum

NCBI taxonomy Id: 765440
Other names: P. croceum F 1598, Piloderma croceum F 1598

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0C3AHL5	A0A0C3GI49	A0A0C3AHL5	A0A0C3GI49	Uncharacterized protein.	Uncharacterized protein.	0.747
A0A0C3AIU8	A0A0C3BS76	A0A0C3AIU8	A0A0C3BS76	Phospholipase.	Phospholipase.	0.777
A0A0C3AIU8	A0A0C3BY16	A0A0C3AIU8	A0A0C3BY16	Phospholipase.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.800
A0A0C3AIU8	A0A0C3C316	A0A0C3AIU8	A0A0C3C316	Phospholipase.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.791
A0A0C3AIU8	A0A0C3C708	A0A0C3AIU8	A0A0C3C708	Phospholipase.	Uncharacterized protein.	0.451
A0A0C3AIU8	A0A0C3CMC7	A0A0C3AIU8	A0A0C3CMC7	Phospholipase.	PNPLA domain-containing protein.	0.591
A0A0C3AIU8	A0A0C3FF00	A0A0C3AIU8	A0A0C3FF00	Phospholipase.	CRAL-TRIO domain-containing protein.	0.456
A0A0C3AIU8	A0A0C3FI88	A0A0C3AIU8	A0A0C3FI88	Phospholipase.	CRAL-TRIO domain-containing protein.	0.638
A0A0C3AIU8	A0A0C3FXC3	A0A0C3AIU8	A0A0C3FXC3	Phospholipase.	Uncharacterized protein.	0.451
A0A0C3AIU8	A0A0C3FYS8	A0A0C3AIU8	A0A0C3FYS8	Phospholipase.	CRAL-TRIO domain-containing protein.	0.521
A0A0C3AIU8	A0A0C3G3F1	A0A0C3AIU8	A0A0C3G3F1	Phospholipase.	JmjC domain-containing protein.	0.551
A0A0C3AWA1	A0A0C3C316	A0A0C3AWA1	A0A0C3C316	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.504
A0A0C3AWA1	A0A0C3CMC7	A0A0C3AWA1	A0A0C3CMC7	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	PNPLA domain-containing protein.	0.526
A0A0C3B4W0	A0A0C3GI49	A0A0C3B4W0	A0A0C3GI49	Uncharacterized protein.	Uncharacterized protein.	0.745
A0A0C3B7I8	A0A0C3C316	A0A0C3B7I8	A0A0C3C316	Uncharacterized protein.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.504
A0A0C3B7I8	A0A0C3CMC7	A0A0C3B7I8	A0A0C3CMC7	Uncharacterized protein.	PNPLA domain-containing protein.	0.526
A0A0C3BLT5	A0A0C3C316	A0A0C3BLT5	A0A0C3C316	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.504
A0A0C3BLT5	A0A0C3CMC7	A0A0C3BLT5	A0A0C3CMC7	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	PNPLA domain-containing protein.	0.526
A0A0C3BNA7	A0A0C3BS76	A0A0C3BNA7	A0A0C3BS76	PLD phosphodiesterase domain-containing protein.	Phospholipase.	0.773
A0A0C3BNA7	A0A0C3BY16	A0A0C3BNA7	A0A0C3BY16	PLD phosphodiesterase domain-containing protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.800