(20 nodes) Carboxy-terminal domain protein kinase complex network (Pyrenochaeta sp. DS3sAY3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	A0A178DZE3	Serine/threonine-protein kinase-like protein; Belongs to the protein kinase superfamily. (440 aa)
	A0A178DZF6	CID domain-containing protein. (231 aa)
	A0A178E0T9	Cyclin-like protein; Belongs to the cyclin family. (339 aa)
	A0A178E2H2	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (491 aa)
	A0A178E463	Transcription factor Tfb4. (377 aa)
	A0A178E5H2	Cyclin-like protein. (413 aa)
	A0A178E5P9	Serine/threonine-protein kinase bur1. (563 aa)
	A0A178EDB3	Uncharacterized protein. (72 aa)
	A0A178EE86	RNA polymerase II transcription factor-like protein. (651 aa)
	A0A178EFG4	CDK-activating kinase assembly factor. (305 aa)
	A0A178EFY0	Uncharacterized protein. (418 aa)
	A0A178EI97	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (462 aa)
	A0A178DHT4	Pkinase-domain-containing protein. (1178 aa)
	A0A178DQT2	Kinase-like protein. (968 aa)
	A0A178DTA4	TFIIH basal transcription factor complex helicase XPB subunit. (802 aa)
	A0A178DTT8	Uncharacterized protein. (248 aa)
	A0A178DV83	Uncharacterized protein. (701 aa)
	A0A178DWF6	Cyclin-like protein; Belongs to the cyclin family. (394 aa)
	A0A178DWP0	Kinase-like protein. (502 aa)
	A0A178DXT9	SGNH hydrolase. (266 aa)

Your Current Organism:

Pyrenochaeta sp. DS3sAY3a

NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178DHT4	A0A178DQT2	Pkinase-domain-containing protein.	Kinase-like protein.	0.773
A0A178DHT4	A0A178DTA4	Pkinase-domain-containing protein.	TFIIH basal transcription factor complex helicase XPB subunit.	0.656
A0A178DHT4	A0A178DV83	Pkinase-domain-containing protein.	Uncharacterized protein.	0.917
A0A178DHT4	A0A178DWF6	Pkinase-domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.983
A0A178DHT4	A0A178DWP0	Pkinase-domain-containing protein.	Kinase-like protein.	0.773
A0A178DHT4	A0A178DZE3	Pkinase-domain-containing protein.	Serine/threonine-protein kinase-like protein; Belongs to the protein kinase superfamily.	0.837
A0A178DHT4	A0A178DZF6	Pkinase-domain-containing protein.	CID domain-containing protein.	0.956
A0A178DHT4	A0A178E0T9	Pkinase-domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.976
A0A178DHT4	A0A178E5H2	Pkinase-domain-containing protein.	Cyclin-like protein.	0.791
A0A178DHT4	A0A178E5P9	Pkinase-domain-containing protein.	Serine/threonine-protein kinase bur1.	0.725
A0A178DHT4	A0A178EFG4	Pkinase-domain-containing protein.	CDK-activating kinase assembly factor.	0.663
A0A178DHT4	A0A178EFY0	Pkinase-domain-containing protein.	Uncharacterized protein.	0.647
A0A178DQT2	A0A178DHT4	Kinase-like protein.	Pkinase-domain-containing protein.	0.773
A0A178DQT2	A0A178DTA4	Kinase-like protein.	TFIIH basal transcription factor complex helicase XPB subunit.	0.941
A0A178DQT2	A0A178DV83	Kinase-like protein.	Uncharacterized protein.	0.668
A0A178DQT2	A0A178DWF6	Kinase-like protein.	Cyclin-like protein; Belongs to the cyclin family.	0.668
A0A178DQT2	A0A178E0T9	Kinase-like protein.	Cyclin-like protein; Belongs to the cyclin family.	0.668
A0A178DQT2	A0A178E2H2	Kinase-like protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.928
A0A178DQT2	A0A178E463	Kinase-like protein.	Transcription factor Tfb4.	0.965
A0A178DQT2	A0A178E5H2	Kinase-like protein.	Cyclin-like protein.	0.969