(6 nodes) Mixed, incl. Ribosomal protein L3, and Ribosomal protein L6 network (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A178AB55	50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (246 aa)
	A0A178APK0	Ribosomal protein L2. (372 aa)
	A0A178AQ02	Mitochondrial 54S ribosomal protein YmL9. (329 aa)
	A0A178ARV3	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (383 aa)
	A0A178ASL3	50S ribosomal protein-like protein L13. (184 aa)
	A0A178B991	60S ribosomal protein-like protein L6; Belongs to the universal ribosomal protein uL6 family. (252 aa)

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178AB55	A0A178APK0	50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	Ribosomal protein L2.	0.998
A0A178AB55	A0A178AQ02	50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	Mitochondrial 54S ribosomal protein YmL9.	0.997
A0A178AB55	A0A178ARV3	50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	0.998
A0A178AB55	A0A178ASL3	50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	50S ribosomal protein-like protein L13.	0.997
A0A178AB55	A0A178B991	50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	60S ribosomal protein-like protein L6; Belongs to the universal ribosomal protein uL6 family.	0.996
A0A178APK0	A0A178AB55	Ribosomal protein L2.	50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.998
A0A178APK0	A0A178AQ02	Ribosomal protein L2.	Mitochondrial 54S ribosomal protein YmL9.	0.999
A0A178APK0	A0A178ARV3	Ribosomal protein L2.	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	0.998
A0A178APK0	A0A178ASL3	Ribosomal protein L2.	50S ribosomal protein-like protein L13.	0.998
A0A178APK0	A0A178B991	Ribosomal protein L2.	60S ribosomal protein-like protein L6; Belongs to the universal ribosomal protein uL6 family.	0.998
A0A178AQ02	A0A178AB55	Mitochondrial 54S ribosomal protein YmL9.	50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.997
A0A178AQ02	A0A178APK0	Mitochondrial 54S ribosomal protein YmL9.	Ribosomal protein L2.	0.999
A0A178AQ02	A0A178ARV3	Mitochondrial 54S ribosomal protein YmL9.	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	0.998
A0A178AQ02	A0A178ASL3	Mitochondrial 54S ribosomal protein YmL9.	50S ribosomal protein-like protein L13.	0.999
A0A178AQ02	A0A178B991	Mitochondrial 54S ribosomal protein YmL9.	60S ribosomal protein-like protein L6; Belongs to the universal ribosomal protein uL6 family.	0.999
A0A178ARV3	A0A178AB55	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.998
A0A178ARV3	A0A178APK0	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L2.	0.998
A0A178ARV3	A0A178AQ02	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	Mitochondrial 54S ribosomal protein YmL9.	0.998
A0A178ARV3	A0A178ASL3	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	50S ribosomal protein-like protein L13.	0.998
A0A178ARV3	A0A178B991	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	60S ribosomal protein-like protein L6; Belongs to the universal ribosomal protein uL6 family.	0.998