(11 nodes) Rough endoplasmic reticulum membrane network (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A178ABA3	Uncharacterized protein. (202 aa)
	A0A178ABL7	Uncharacterized protein. (476 aa)
	A0A178AE28	Uncharacterized protein. (547 aa)
	A0A178AID2	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (110 aa)
	A0A178ANJ3	P-loop containing nucleoside triphosphate hydrolase protein. (642 aa)
	A0A178B149	Uncharacterized protein. (561 aa)
	A0A178B1R2	P-loop containing nucleoside triphosphate hydrolase protein. (295 aa)
	A0A178B614	J domain-containing protein. (691 aa)
	A0A178B6U3	SecY protein. (476 aa)
	A0A178BAA6	SecE/sec61-gamma protein. (69 aa)
	A0A178BCG2	Uncharacterized protein. (218 aa)

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178ABA3	A0A178AID2	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.730
A0A178ABA3	A0A178B614	Uncharacterized protein.	J domain-containing protein.	0.843
A0A178ABA3	A0A178B6U3	Uncharacterized protein.	SecY protein.	0.821
A0A178ABA3	A0A178BAA6	Uncharacterized protein.	SecE/sec61-gamma protein.	0.846
A0A178ABA3	A0A178BCG2	Uncharacterized protein.	Uncharacterized protein.	0.873
A0A178ABL7	A0A178AID2	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.730
A0A178ABL7	A0A178B614	Uncharacterized protein.	J domain-containing protein.	0.843
A0A178ABL7	A0A178B6U3	Uncharacterized protein.	SecY protein.	0.821
A0A178ABL7	A0A178BAA6	Uncharacterized protein.	SecE/sec61-gamma protein.	0.846
A0A178ABL7	A0A178BCG2	Uncharacterized protein.	Uncharacterized protein.	0.843
A0A178AE28	A0A178AID2	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.730
A0A178AE28	A0A178B614	Uncharacterized protein.	J domain-containing protein.	0.843
A0A178AE28	A0A178B6U3	Uncharacterized protein.	SecY protein.	0.821
A0A178AE28	A0A178BAA6	Uncharacterized protein.	SecE/sec61-gamma protein.	0.846
A0A178AE28	A0A178BCG2	Uncharacterized protein.	Uncharacterized protein.	0.843
A0A178AID2	A0A178ABA3	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Uncharacterized protein.	0.730
A0A178AID2	A0A178ABL7	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Uncharacterized protein.	0.730
A0A178AID2	A0A178AE28	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Uncharacterized protein.	0.730
A0A178AID2	A0A178ANJ3	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	P-loop containing nucleoside triphosphate hydrolase protein.	0.486
A0A178AID2	A0A178B149	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Uncharacterized protein.	0.730