STRINGSTRING
AFL72178.1 AFL72178.1 AFL72239.1 AFL72239.1 AFL72325.1 AFL72325.1 AFL72326.1 AFL72326.1 AFL72327.1 AFL72327.1 AFL72555.1 AFL72555.1 AFL72556.1 AFL72556.1 AFL72559.1 AFL72559.1 AFL72560.1 AFL72560.1 AFL72581.1 AFL72581.1 AFL72613.1 AFL72613.1 AFL72614.1 AFL72614.1 AFL72671.1 AFL72671.1 AFL72729.1 AFL72729.1 AFL72753.1 AFL72753.1 AFL72962.1 AFL72962.1 AFL72970.1 AFL72970.1 AFL72976.1 AFL72976.1 AFL72987.1 AFL72987.1 AFL73075.1 AFL73075.1 AFL73078.1 AFL73078.1 AFL73084.1 AFL73084.1 AFL73085.1 AFL73085.1 AFL73086.1 AFL73086.1 AFL73158.1 AFL73158.1 AFL73161.1 AFL73161.1 AFL73306.1 AFL73306.1 AFL73319.1 AFL73319.1 AFL73322.1 AFL73322.1 AFL73386.1 AFL73386.1 AFL73701.1 AFL73701.1 ubiE ubiE AFL73789.1 AFL73789.1 AFL73860.1 AFL73860.1 glcB glcB AFL74617.1 AFL74617.1 AFL74620.1 AFL74620.1 AFL74694.1 AFL74694.1 AFL74696.1 AFL74696.1 ppc ppc AFL74733.1 AFL74733.1 AFL74762.1 AFL74762.1 AFL74814.1 AFL74814.1 AFL74815.1 AFL74815.1 AFL74816.1 AFL74816.1 AFL74817.1 AFL74817.1 AFL74818.1 AFL74818.1 AFL74851.1 AFL74851.1 AFL74853.1 AFL74853.1 AFL74991.1 AFL74991.1 AFL75116.1 AFL75116.1 AFL75172.1 AFL75172.1 sucC sucC sucD sucD AFL75420.1 AFL75420.1 AFL75457.1 AFL75457.1 AFL75535.1 AFL75535.1 AFL75546.1 AFL75546.1 AFL75591.1 AFL75591.1 AFL75603.1 AFL75603.1 AFL75604.1 AFL75604.1 AFL75605.1 AFL75605.1 AFL75697.1 AFL75697.1 nuoD nuoD AFL75752.1 AFL75752.1 AFL75754.1 AFL75754.1 nuoH nuoH nuoI nuoI nuoK nuoK AFL75759.1 AFL75759.1 AFL75760.1 AFL75760.1 nuoN nuoN AFL75770.1 AFL75770.1 AFL75772.1 AFL75772.1 AFL75773.1 AFL75773.1 AFL75774.1 AFL75774.1 AFL75775.1 AFL75775.1 aceK aceK AFL76055.1 AFL76055.1 AFL76057.1 AFL76057.1 AFL76098.1 AFL76098.1 AFL76156.1 AFL76156.1 AFL76158.1 AFL76158.1 AFL76159.1 AFL76159.1 AFL76160.1 AFL76160.1 AFL76267.1 AFL76267.1 AFL76269.1 AFL76269.1 AFL76326.1 AFL76326.1 AFL76327.1 AFL76327.1 AFL76328.1 AFL76328.1 AFL76360.1 AFL76360.1 AFL76361.1 AFL76361.1 AFL76364.1 AFL76364.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFL72178.1PFAM: Cytochrome b(N-terminal)/b6/petB. (231 aa)
AFL72239.1PFAM: Cytochrome b(N-terminal)/b6/petB. (185 aa)
AFL72325.1PFAM: Membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT. (38 aa)
AFL72326.1PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB). (380 aa)
AFL72327.1Cytochrome bd-type quinol oxidase, subunit 1; PFAM: Bacterial Cytochrome Ubiquinol Oxidase. (534 aa)
AFL72555.1NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus. (644 aa)
AFL72556.1Formate hydrogenlyase subunit 4; PFAM: NADH dehydrogenase. (286 aa)
AFL72559.1Ni,Fe-hydrogenase III large subunit; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase. (360 aa)
AFL72560.1Ech hydrogenase subunit F. (116 aa)
AFL72581.1PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); Belongs to the citrate synthase family. (429 aa)
AFL72613.1Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain. (261 aa)
AFL72614.1PFAM: Polysulphide reductase, NrfD. (416 aa)
AFL72671.1Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (691 aa)
AFL72729.1Fe-S oxidoreductase; PFAM: Cysteine-rich domain. (408 aa)
AFL72753.1Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); PFAM: Cytochrome b(N-terminal)/b6/petB. (217 aa)
AFL72962.1PFAM: Cytochrome b(N-terminal)/b6/petB. (182 aa)
AFL72970.1Oligoketide cyclase/lipid transport protein; PFAM: Polyketide cyclase / dehydrase and lipid transport; manually curated. (144 aa)
AFL72976.1High potential iron-sulfur protein; Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria; Belongs to the high-potential iron-sulfur protein (HiPIP) family. (120 aa)
AFL72987.1Hypothetical protein. (429 aa)
AFL73075.1Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (298 aa)
AFL73078.1PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (477 aa)
AFL73084.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N. (491 aa)
AFL73085.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains. (590 aa)
AFL73086.1Formate hydrogenlyase subunit 4; PFAM: NADH dehydrogenase. (303 aa)
AFL73158.1NADH:ubiquinone oxidoreductase chain G-like protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S binding domain. (243 aa)
AFL73161.1Coenzyme F420-reducing hydrogenase, alpha subunit; PFAM: Nickel-dependent hydrogenase. (476 aa)
AFL73306.1Hypothetical protein. (485 aa)
AFL73319.1Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (576 aa)
AFL73322.1Hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA). (354 aa)
AFL73386.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains. (606 aa)
AFL73701.1PFAM: Cytochrome c552. (501 aa)
ubiEUbiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (249 aa)
AFL73789.1Cytochrome b subunit of formate dehydrogenase. (659 aa)
AFL73860.1Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (887 aa)
glcBMalate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (730 aa)
AFL74617.1Hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA). (369 aa)
AFL74620.1Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (576 aa)
AFL74694.1TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (255 aa)
AFL74696.1PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family. (210 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (934 aa)
AFL74733.1Phosphoenolpyruvate carboxylase, type 1. (406 aa)
AFL74762.1PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); Belongs to the citrate synthase family. (431 aa)
AFL74814.1Ni,Fe-hydrogenase III large subunit; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase. (583 aa)
AFL74815.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains. (490 aa)
AFL74816.1Hydrogenase 4 membrane component (E). (240 aa)
AFL74817.1Formate hydrogenlyase subunit 4; PFAM: NADH dehydrogenase. (321 aa)
AFL74818.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains. (670 aa)
AFL74851.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains. (505 aa)
AFL74853.1PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; Domain related to MnhB subunit of Na+/H+ antiporter; TIGRFAM: Tmonovalent cation:proton antiporter. (936 aa)
AFL74991.1FAD binding protein. (427 aa)
AFL75116.1PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family. (385 aa)
AFL75172.1PFAM: domain; FAD binding domain; TIGRFAM: adenosine phosphosulphate reductase, alpha subunit. (659 aa)
sucCsuccinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (398 aa)
sucDsuccinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
AFL75420.1PFAM: Cytochrome b(N-terminal)/b6/petB. (185 aa)
AFL75457.1Fe-S oxidoreductase; PFAM: Cysteine-rich domain. (400 aa)
AFL75535.1Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I. (755 aa)
AFL75546.1Coenzyme F420-reducing hydrogenase, alpha subunit; PFAM: Nickel-dependent hydrogenase. (396 aa)
AFL75591.1Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (414 aa)
AFL75603.1PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit. (230 aa)
AFL75604.1Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (596 aa)
AFL75605.1Hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA). (365 aa)
AFL75697.1PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component. (942 aa)
nuoDNADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (418 aa)
AFL75752.1PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit. (175 aa)
AFL75754.1NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (807 aa)
nuoHNADH:ubiquinone oxidoreductase subunit 1 (chain H); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (344 aa)
nuoINADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (163 aa)
nuoKNADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (101 aa)
AFL75759.1PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L. (668 aa)
AFL75760.1PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone oxidoreductase chain 4, amino terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M. (531 aa)
nuoNNADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (479 aa)
AFL75770.1Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); PFAM: Cytochrome b(N-terminal)/b6/petB. (209 aa)
AFL75772.1Hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); Tat (twin-arginine translocation) pathway signal sequence. (404 aa)
AFL75773.1Fe-S-cluster-containing hydrogenase subunit. (343 aa)
AFL75774.1PFAM: Polysulphide reductase, NrfD. (381 aa)
AFL75775.1Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (567 aa)
aceKIsocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. (583 aa)
AFL76055.1Nitrate reductase cytochrome c-type subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (141 aa)
AFL76057.1Periplasmic nitrate reductase subunit NapG; TIGRFAM: MauM/NapG family ferredoxin-type protein. (294 aa)
AFL76098.1Fe-S oxidoreductase. (446 aa)
AFL76156.1TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (230 aa)
AFL76158.1PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (587 aa)
AFL76159.1PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein. (116 aa)
AFL76160.1PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit. (127 aa)
AFL76267.1PFAM: Dihaem cytochrome c. (202 aa)
AFL76269.1PFAM: Cytochrome b(N-terminal)/b6/petB. (206 aa)
AFL76326.1Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (966 aa)
AFL76327.1Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain. (240 aa)
AFL76328.1PFAM: DMSO reductase anchor subunit (DmsC). (325 aa)
AFL76360.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains. (352 aa)
AFL76361.1Hypothetical protein. (248 aa)
AFL76364.1PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type. (418 aa)
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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